RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 MARCOQ9UEW3 520 aaPredicted RBP24.96■■□□□ 1.59
CBX4-202ENST00000448310 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.96■■□□□ 1.59
CBX4-202ENST00000448310 GDF2Q9UK05 429 aaPredicted RBP24.96■■□□□ 1.59
CBX4-202ENST00000448310 SPIN1Q9Y657 262 aaPredicted RBP24.96■■□□□ 1.59
CBX4-202ENST00000448310 V9GYY5 206 aaPredicted RBP24.96■■□□□ 1.59
CBX4-202ENST00000448310 IGKV3D-15A0A087WSY6 115 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 ZNF716A6NP11 495 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 ABCD4O14678 606 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 ADAM11O75078 769 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 CHI3L1P36222 383 aaPredicted RBP24.95■■□□□ 1.58
CBX4-202ENST00000448310 SLC1A6P48664 564 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 CDH11P55287 796 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 CHRNEQ04844 493 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 GPAT3Q53EU6 434 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 DNAJC14Q6Y2X3 702 aaPredicted RBP24.95■■□□□ 1.58
CBX4-202ENST00000448310 GRINAQ7Z429 371 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 VPS37AQ8NEZ2 397 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 ALG2Q9H553 416 aa24.95■■□□□ 1.58
CBX4-202ENST00000448310 NOSIPQ9Y314 301 aaKnown RBP24.95■■□□□ 1.58
CBX4-202ENST00000448310 OR5H1A6NKK0 313 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 BIRC5O15392 142 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 RGS16O15492 202 aaPredicted RBP24.94■■□□□ 1.58
CBX4-202ENST00000448310 PGM3O95394 542 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 GUSBP08236 651 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 BGNP21810 368 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 NTF4P34130 210 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 NME5P56597 212 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 KCNJ10P78508 379 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 FAM174BQ3ZCQ3 159 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 FBXW9Q5XUX1 488 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 ADGRG3Q86Y34 549 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 CCDC103Q8IW40 242 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 APH1AQ96BI3 265 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 ZHX1-C8orf76Q96EF9 292 aa24.94■■□□□ 1.58
CBX4-202ENST00000448310 EPB41L3Q9Y2J2 1087 aaPredicted RBP24.94■■□□□ 1.58
CBX4-202ENST00000448310 A0A1W2PR80 420 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 PMS2P2O95744 297 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 LBPP18428 481 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 HPCAP84074 193 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 DMTNQ08495 405 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 PDK3Q15120 406 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 ARFGAP2Q8N6H7 521 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 OR52N5Q8NH56 324 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 OIT3Q8WWZ8 545 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 CNOT9Q92600 299 aaKnown RBP24.93■■□□□ 1.58
CBX4-202ENST00000448310 TEX37Q96LM6 180 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 HEATR1Q9H583 2144 aaKnown RBP24.93■■□□□ 1.58
CBX4-202ENST00000448310 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.93■■□□□ 1.58
CBX4-202ENST00000448310 PNPOQ9NVS9 261 aa24.93■■□□□ 1.58
CBX4-202ENST00000448310 CIB4A0PJX0 185 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 E9PBE3 544 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 HMGN4O00479 90 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 AP3D1O14617 1153 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 THBS1P07996 1170 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 DHRS4L1P0CG22 281 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 S100A3P33764 101 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 IDH2P48735 452 aaKnown RBP24.92■■□□□ 1.58
CBX4-202ENST00000448310 CLNS1AP54105 237 aaKnown RBP24.92■■□□□ 1.58
CBX4-202ENST00000448310 OR2B6P58173 313 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 SPOCK1Q08629 439 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 WDR93Q6P2C0 686 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 P2RY8Q86VZ1 359 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 RNF130Q86XS8 419 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 PIAS4Q8N2W9 510 aaPredicted RBP24.92■■□□□ 1.58
CBX4-202ENST00000448310 ANKFN1Q8N957 763 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 HS6ST2Q96MM7 605 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 EXOSC3Q9NQT5 275 aaKnown RBP24.92■■□□□ 1.58
CBX4-202ENST00000448310 HDGFL3Q9Y3E1 203 aa24.92■■□□□ 1.58
CBX4-202ENST00000448310 ATRQ13535 2644 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 CCT8L1PA6NM43 557 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 CRLF1O75462 422 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 ZNF83P51522 516 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 FOXG1P55316 489 aaPredicted RBP24.91■■□□□ 1.58
CBX4-202ENST00000448310 MPP2Q14168 576 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 SYPL1Q16563 259 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 AP1ARQ63HQ0 302 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 DTX2Q86UW9 622 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 PIGXQ8TBF5 258 aa24.91■■□□□ 1.58
CBX4-202ENST00000448310 TM9SF1O15321 606 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 ALDOCP09972 364 aaKnown RBP24.9■■□□□ 1.58
CBX4-202ENST00000448310 UFM1P61960 85 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 DPY19L1Q2PZI1 675 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 DNM1P46Q6ZS02 220 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 MREGQ8N565 214 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 CCDC115Q96NT0 180 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 INPP5KQ9BT40 448 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 CENPHQ9H3R5 247 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 MEAF6Q9HAF1 191 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 SSU72Q9NP77 194 aaKnown RBP24.9■■□□□ 1.58
CBX4-202ENST00000448310 FAIMQ9NVQ4 179 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 ASB6Q9NWX5 421 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 HAO1Q9UJM8 370 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 B3GALT5Q9Y2C3 310 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 COL6A5A8TX70 2615 aa24.9■■□□□ 1.58
CBX4-202ENST00000448310 TMED7-TICAM2A0A0A6YYA0 188 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 MRPL33O75394 65 aaKnown RBP24.89■■□□□ 1.58
CBX4-202ENST00000448310 CHRM4P08173 479 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 CDKN2CP42773 168 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 SLC16A1P53985 500 aa24.89■■□□□ 1.58
CBX4-202ENST00000448310 STX3Q13277 289 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms