RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 INAQ16352 499 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 TMEM44Q2T9K0 475 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 PRPF38BQ5VTL8 546 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 WBP2NLQ6ICG8 309 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 MEPCEQ7L2J0 689 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 RABEPKQ7Z6M1 372 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF440Q8IYI8 595 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 GHDCQ8N2G8 530 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SLC37A3Q8NCC5 494 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR6Q1Q8NGQ2 317 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 C17orf50Q8WW18 174 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 PTP4A1Q93096 173 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 C3orf49Q96BT1 292 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 C1GALT1C1Q96EU7 318 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 DNAJA3Q96EY1 480 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 DEPDC7Q96QD5 511 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 RTN4RQ9BZR6 473 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SMOC1Q9H4F8 434 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 MCCC2Q9HCC0 563 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 NDUFB5O43674 189 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 GDF9O60383 454 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SERPINI2O75830 405 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 MRPL3P09001 348 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 LIMS3P0CW19 117 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 LIMS4P0CW20 117 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF3P17036 446 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 HK1P19367 917 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SLC6A6P31641 620 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 CRYBB2P43320 205 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 TMED10P49755 219 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 DCAF7P61962 342 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 DCDP81605 110 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SKP2Q13309 424 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 ATP1A4Q13733 1029 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 CRMP1Q14194 572 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF791Q3KP31 576 aaPredicted RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 C19orf48Q6RUI8 117 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 C16orf47Q6ZP98 133 aaPredicted RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SNX29P2Q8IUI4 249 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 GID4Q8IVV7 300 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SIRT6Q8N6T7 355 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 FAM181AQ8N9Y4 354 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 FAM98AQ8NCA5 519 aaKnown RBP8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR52E2Q8NGJ4 325 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 OR4K13Q8NH42 304 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 S100ZQ8WXG8 99 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 TM9SF4Q92544 642 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 NAT6Q93015 286 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 OMA1Q96E52 524 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 KCNS3Q9BQ31 491 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 ASPNQ9BXN1 380 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 TBL1XR1Q9BZK7 514 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 TPK1Q9H3S4 243 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 CMC2Q9NRP2 79 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 NDUFB11Q9NX14 153 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 OCIAD1Q9NX40 245 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SEC14L4Q9UDX3 406 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 FBXL4Q9UKA2 621 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 STUB1Q9UNE7 303 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 SSR3Q9UNL2 185 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 RP1P56715 2156 aa8.72□□□□□ -1.01
COL6A4P1-201ENST00000446690 TMEM129A0AVI4 362 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 IDSB3KWA1 339 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 BLOC1S5-TXNDC5H3BN57 136 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 SCO2O43819 266 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 SULT1C4O75897 302 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 ANKRD34CP0C6C1 535 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 BMP4P12644 408 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 PEPDP12955 493 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 CPEP16870 476 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 ABCD3P28288 659 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 SOX6P35712 828 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 MXD1Q05195 221 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 SQSTM1Q13501 440 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 FNDC7Q5VTL7 733 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 NIPAL3Q6P499 406 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 PPP1R3BQ86XI6 285 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 PLPP5Q8NEB5 264 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 C7orf57Q8NEG2 295 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 SMAP2Q8WU79 429 aaPredicted RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 SPRYD4Q8WW59 207 aaPredicted RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 METTL21AQ8WXB1 218 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 RELTQ969Z4 430 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 ZNF524Q96C55 264 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 TRMT61AQ96FX7 289 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 GFM1Q96RP9 751 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 TEAD3Q99594 435 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 KLHDC3Q9BQ90 382 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 WDR12Q9GZL7 423 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 MMP27Q9H306 513 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 AKIP1Q9NQ31 210 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 ERVK13-1Q9NX77 482 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 EXOGQ9Y2C4 368 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 YARS2Q9Y2Z4 477 aaKnown RBP8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 IER3IP1Q9Y5U9 82 aa8.71□□□□□ -1.01
COL6A4P1-201ENST00000446690 METTL15A6NJ78 407 aa8.71□□□□□ -1.02
COL6A4P1-201ENST00000446690 MCIDASD6RGH6 385 aa8.71□□□□□ -1.02
COL6A4P1-201ENST00000446690 PLD2O14939 933 aa8.71□□□□□ -1.02
COL6A4P1-201ENST00000446690 NDUFB2O95178 105 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms