RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 LRRC31Q6UY01 552 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 PAQR9Q6ZVX9 377 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 CBWD2Q8IUF1 395 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCDC36Q8IYA8 594 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 KDM8Q8N371 416 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 CD177Q8N6Q3 437 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 RNF148Q8N7C7 305 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCDC127Q96BQ5 260 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 PPP1R16AQ96I34 528 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 SAMD8Q96LT4 415 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 TSPAN18Q96SJ8 248 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ERP44Q9BS26 406 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ATG10Q9H0Y0 220 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 DPH5Q9H2P9 285 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 CENPHQ9H3R5 247 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMBIM4Q9HC24 238 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 MRPL47Q9HD33 250 aaKnown RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 TIGARQ9NQ88 270 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZNF302Q9NR11 478 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 RSPH14Q9UHP6 348 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 COQ4Q9Y3A0 265 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 RRP15Q9Y3B9 282 aaKnown RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 ALG6Q9Y672 507 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 FKBP7Q9Y680 259 aa3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 COL11A1P12107 1806 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P6-201ENST00000444896 MYH9P35579 1960 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMEM150BA6NC51 233 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 LRRIQ4A6NIV6 560 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ANKRD63C9JTQ0 380 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SGK494L7N484 410 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 PSTPIP1O43586 416 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 HLA-DRAP01903 254 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 KRT14P02533 472 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CALB1P05937 261 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CLTAP09496 248 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ALPIP09923 528 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ADSSP30520 456 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 HPDP32754 393 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 RDXP35241 583 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 YWHAEP62258 255 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 NOP14P78316 857 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 IRX3P78415 501 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CXCL6P80162 114 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CAV1Q03135 178 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 BNIP1Q12981 228 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SNX1Q13596 522 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CUL2Q13617 745 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SLC10A1Q14973 349 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 PPP1R7Q15435 360 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 C1orf220Q5T0J3 134 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 KCTD16Q68DU8 428 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 DUPD1Q68J44 220 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 PNCKQ6P2M8 343 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCDC137Q6PK04 289 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZNF562Q6V9R5 426 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 TSEN54Q7Z6J9 526 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SLC13A5Q86YT5 568 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ZBTB8OSQ8IWT0 167 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 IQCKQ8N0W5 287 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 BBOF1Q8ND07 529 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 RFESDQ8TAC1 157 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 VN1R17PQ8TDU5 208 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 MAGOHBQ96A72 148 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SLC25A36Q96CQ1 311 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CCT8L2Q96SF2 557 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 NSRP1Q9H0G5 558 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 PORCNQ9H237 461 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 TMEM231Q9H6L2 316 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 AZI2Q9H6S1 392 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 TNFRSF19Q9NS68 423 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 NRBP2Q9NSY0 501 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 DCAF13Q9NV06 445 aaKnown RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SOHLH2Q9NX45 425 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 RBAKQ9NYW8 714 aaPredicted RBP3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SENP1Q9P0U3 644 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 PCYOX1Q9UHG3 505 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 BCAP29Q9UHQ4 241 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ANAPC7Q9UJX3 599 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 PLA2G4CQ9UP65 541 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 NTNG1Q9Y2I2 539 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 SIP14410 1827 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 GRIN2DO15399 1336 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 ADGRA3Q8IWK6 1321 aa3.34□□□□□ -1.87
HMGB3P6-201ENST00000444896 CROCCQ5TZA2 2017 aa3.34□□□□□ -1.88
HMGB3P6-201ENST00000444896 A0A0G2JMZ2 1700 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 WDR90Q96KV7 1748 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 RLFQ13129 1914 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 IGHV3-35A0A0C4DH35 117 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 RNF103-CHMP3A0A140T963 221 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 FRG2CA6NGY1 282 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 EFCAB7A8K855 629 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 A8MX80 341 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 C11orf98E9PRG8 122 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 G3V3Y1 287 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 H0YL77 283 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 RGS16O15492 202 aaPredicted RBP3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 CLDN3O15551 220 aa3.33□□□□□ -1.88
HMGB3P6-201ENST00000444896 PROSCO94903 275 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms