RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 PSMB1P20618 241 aaKnown RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 HOXC12P31275 282 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 MAGEA8P43361 318 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 IDH2P48735 452 aaKnown RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 RASGEF1BQ0VAM2 473 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM201Q5SNT2 666 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 MRPL2Q5T653 305 aaKnown RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ABLIM2Q6H8Q1 611 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 SLC2A7Q6PXP3 512 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF836Q6ZNA1 936 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 TMPPEQ6ZT21 453 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 WFDC8Q8IUA0 241 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 MSRB3Q8IXL7 192 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF563Q8TA94 476 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 WDR60Q8WVS4 1066 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 IGFBPL1Q8WX77 278 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM234Q8WY98 164 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 GTF2H4Q92759 462 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 SIKE1Q9BRV8 207 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 GSX1Q9H4S2 264 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 RABEP2Q9H5N1 569 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 TPT1P8Q9HAU6 139 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 TIGARQ9NQ88 270 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.64□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM45AQ9NWC5 275 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 SLC25A37Q9NYZ2 338 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 SLAMF8Q9P0V8 285 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 CHRNA9Q9UGM1 479 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 LIPT1Q9Y234 373 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 PCDHB14Q9Y5E9 798 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 PLCE1Q9P212 2302 aa9.64□□□□□ -0.87
SF3A1-203ENST00000444440 UQCRHLA0A096LP55 91 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TMED7-TICAM2A0A0A6YYA0 188 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM72A0PK05 275 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 ADAP00813 363 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TFPTP0C1Z6 253 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 ZCCHC18P0CG32 403 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 IMPDH2P12268 514 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 PRG2P13727 222 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 OR3A2P47893 321 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 MRPL19P49406 292 aaKnown RBP9.63□□□□□ -0.87
SF3A1-203ENST00000444440 FOXG1P55316 489 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-203ENST00000444440 DSTNP60981 165 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 HPCAP84074 193 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 EPS8Q12929 822 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TAB1Q15750 504 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 ACKR1Q16570 336 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 SFRP5Q5T4F7 317 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 GTF2IRD2BQ6EKJ0 949 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 ALKBH2Q6NS38 261 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 GRINAQ7Z429 371 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 GTF2IRD2Q86UP8 949 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 CCDC103Q8IW40 242 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 CLIP4Q8N3C7 705 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 LILRB1Q8NHL6 650 aaPredicted RBP9.63□□□□□ -0.87
SF3A1-203ENST00000444440 SLC38A5Q8WUX1 472 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 OIT3Q8WWZ8 545 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 STON2Q8WXE9 905 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 MAL2Q969L2 176 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 PLPPR2Q96GM1 343 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM19Q96HH6 336 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 REXO5Q96IC2 774 aaKnown RBP9.63□□□□□ -0.87
SF3A1-203ENST00000444440 SMR3AQ99954 134 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TMEM204Q9BSN7 226 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 GP6Q9HCN6 339 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 MED4Q9NPJ6 270 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF446Q9NWS9 450 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 KLHL9Q9P2J3 617 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 OSGIN1Q9UJX0 560 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TRIM33Q9UPN9 1127 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 GPR52Q9Y2T5 361 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 TMED7Q9Y3B3 224 aa9.63□□□□□ -0.87
SF3A1-203ENST00000444440 CDHR4A6H8M9 788 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 SULT2B1O00204 365 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 EDF1O60869 148 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 LYZL6O75951 148 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 PMS2P2O95744 297 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 IGHV3-9P01782 118 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 DBIP07108 87 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 PABPC4LP0CB38 370 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 TFPIP10646 304 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 IL7RP16871 459 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 IGHV1-2P23083 117 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 TACR3P29371 465 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 APOBEC1P41238 236 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 ACAA2P42765 397 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 CRATP43155 626 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 ATP4BP51164 291 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 PAGE3Q5JUK9 113 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 MTDHQ86UE4 582 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 STK32CQ86UX6 486 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 COMTD1Q86VU5 262 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 CMIPQ8IY22 773 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 SLC43A2Q8N370 569 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 OR52P1PQ8NH57 321 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 PMM1Q92871 262 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 NEUROG1Q92886 237 aa9.62□□□□□ -0.87
SF3A1-203ENST00000444440 THOC1Q96FV9 657 aaKnown RBP9.62□□□□□ -0.87
SF3A1-203ENST00000444440 ADAM19Q9H013 955 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms