RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 ZNF607Q96SK3 696 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 CCDC106Q9BWC9 280 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 SRXN1Q9BYN0 137 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 KLHL4Q9C0H6 718 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 COQ10BQ9H8M1 238 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 RASSF1Q9NS23 344 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 KLHL28Q9NXS3 571 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 SLC25A37Q9NYZ2 338 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 SLAMF8Q9P0V8 285 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 TMEM181Q9P2C4 612 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 TRAPPC4Q9Y296 219 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 TMED7Q9Y3B3 224 aa9.35□□□□□ -0.91
MCF2L-216ENST00000439475 FAM221AA4D161 298 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 AP3D1O14617 1153 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 GPR171O14626 319 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 EIF1BO60739 113 aaKnown RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 CYTIPO60759 359 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 BCAS1O75363 584 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 NUDT7P0C024 238 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 GKN3PP0CG01 181 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 HOXB9P17482 250 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 AGTR1P30556 359 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 PRKAR1BP31321 381 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 OR2B6P58173 313 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 SLC35A1P78382 337 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 GUCY1A3Q02108 690 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 SCARB2Q14108 478 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 PDK3Q15120 406 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 EXOC3L2Q2M3D2 409 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 RPS26P11Q5JNZ5 115 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 DLEU7Q6UYE1 221 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 SLC30A8Q8IWU4 369 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 TUSC5Q8IXB3 177 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 CADM2Q8N3J6 435 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 PCYOX1LQ8NBM8 494 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 C11orf65Q8NCR3 313 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 HIPK4Q8NE63 616 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 NFKBIDQ8NI38 313 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 ABHD3Q8WU67 409 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 MAL2Q969L2 176 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 CGREF1Q99674 301 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 USB1Q9BQ65 265 aaKnown RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 GPATCH1Q9BRR8 931 aaKnown RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 MED18Q9BUE0 208 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 TAPBPLQ9BX59 468 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 HDHD5Q9BXW7 423 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 ADAM19Q9H013 955 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 OR10A4Q9H209 315 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 CLEC4MQ9H2X3 399 aaPredicted RBP9.34□□□□□ -0.91
MCF2L-216ENST00000439475 ZNF385DQ9H6B1 395 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 C12orf49Q9H741 205 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 BCO1Q9HAY6 547 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 RLIMQ9NVW2 624 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 EMC3Q9P0I2 261 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 KLHL14Q9P2G3 628 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 KLHL13Q9P2N7 655 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 RPS6KB2Q9UBS0 482 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 OSGIN1Q9UJX0 560 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 ANGPT4Q9Y264 503 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 GPR52Q9Y2T5 361 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
MCF2L-216ENST00000439475 TRBV5-3A0A0A0MS03 114 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 IGHV3-15A0A0B4J1V0 119 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF724A8MTY0 619 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 BBIP1A8MTZ0 92 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 NPPAP01160 153 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 UGT2B10P36537 528 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 KRTAP10-9P60411 292 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 NCALDP61601 193 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 KLF10Q13118 480 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 CYP51A1Q16850 503 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 COQ5Q5HYK3 327 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 INTS11Q5TA45 600 aaKnown RBP9.33□□□□□ -0.92
MCF2L-216ENST00000439475 GALNT5Q7Z7M9 940 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 CDH24Q86UP0 819 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 MSRB3Q8IXL7 192 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 CLIP4Q8N3C7 705 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 PIGXQ8TBF5 258 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 SLC26A7Q8TE54 656 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 ZNF524Q96C55 264 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 PSD2Q9BQI7 771 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 CPPED1Q9BRF8 314 aaPredicted RBP9.33□□□□□ -0.92
MCF2L-216ENST00000439475 GID8Q9NWU2 228 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 SELENONQ9NZV5 590 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 ITGB1BP2Q9UKP3 347 aa9.33□□□□□ -0.92
MCF2L-216ENST00000439475 TMEM72A0PK05 275 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 A8MVM7 634 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 SMAD9O15198 467 aaKnown RBP9.32□□□□□ -0.92
MCF2L-216ENST00000439475 SLC22A2O15244 555 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 CCDC22O60826 627 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 ADAM11O75078 769 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 GPIP06744 558 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 FESP07332 822 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 PSMB1P20618 241 aaKnown RBP9.32□□□□□ -0.92
MCF2L-216ENST00000439475 IDUAP35475 653 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 ACAA2P42765 397 aaKnown RBP9.32□□□□□ -0.92
MCF2L-216ENST00000439475 SF3A3Q12874 501 aaKnown RBP eCLIP9.32□□□□□ -0.925e-9■■■■□ 22.3
MCF2L-216ENST00000439475 DHRS4L2Q6PKH6 230 aa9.32□□□□□ -0.92
MCF2L-216ENST00000439475 NUFIP2Q7Z417 695 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms