RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 ADGRL4Q9HBW9 690 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 CAMK2AQ9UQM7 478 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 MDC1Q14676 2089 aaKnown RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 BHLHE40O14503 412 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 TBX19O60806 448 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 HMGN1P05114 100 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 PITPNAQ00169 270 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 CRMP1Q14194 572 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ETFDHQ16134 617 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ZNF805Q5CZA5 627 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SLITRK4Q8IW52 837 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SLC35A4Q96G79 324 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ARL6Q9H0F7 186 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 POT1Q9NUX5 634 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 MED17Q9NVC6 651 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 SIDT1Q9NXL6 827 aaKnown RBP12.53□□□□□ -0.4
PCNX3-202ENST00000439247 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 MSRAQ9UJ68 235 aa12.53□□□□□ -0.4
PCNX3-202ENST00000439247 FXYD6-FXYD2A0A087WZ82 144 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 IGKV1-8A0A0C4DH67 115 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 UNC119BA6NIH7 251 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 FAM74A7A6NL05 159 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 A8MXK9 166 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 IDSB3KWA1 339 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 WASH3PC4AMC7 463 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 H3BSH0 61 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 LINC01565O15544 149 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 FLRT2O43155 660 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 ERI3O43414 337 aaKnown RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 KHDRBS3O75525 346 aaKnown RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 TPPPO94811 219 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 SBK2P0C263 348 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 NAA10P41227 235 aaPredicted RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 FOXK2Q01167 660 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 FAM74A3Q4VXF1 159 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 DMKNQ6E0U4 476 aaPredicted RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 HEPHL1Q6MZM0 1159 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 FAM111BQ6SJ93 734 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 GID4Q8IVV7 300 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 SLC44A3Q8N4M1 653 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 BOLLQ8N9W6 283 aaKnown RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 LINC01555Q8NAE3 123 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 CDS1Q92903 461 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 ZMYND19Q96E35 227 aaPredicted RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 DTD2Q96FN9 168 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 MRGPRX3Q96LB0 322 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 FXYD6Q9H0Q3 95 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 ZDHHC4Q9NPG8 344 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 USP36Q9P275 1121 aaKnown RBP12.52□□□□□ -0.4
PCNX3-202ENST00000439247 CPNE7Q9UBL6 633 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 CA5BQ9Y2D0 317 aa12.52□□□□□ -0.4
PCNX3-202ENST00000439247 A0A1W2PPV9 198 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 FMO6PO60774 539 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 CERS1P27544 350 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 PPP1R16AQ96I34 528 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 LRIG1Q96JA1 1093 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 GFI1Q99684 422 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 PRSS27Q9BQR3 290 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 GINS4Q9BRT9 223 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 PCDHGA9Q9Y5G4 932 aaKnown RBP12.52□□□□□ -0.41
PCNX3-202ENST00000439247 SESN1Q9Y6P5 492 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 DOCK9Q9BZ29 2069 aa12.52□□□□□ -0.41
PCNX3-202ENST00000439247 LRIT2A6NDA9 550 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 ACOD1A6NK06 481 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 IMPA2O14732 288 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 SPDEFO95238 335 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 AIFM1O95831 613 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 TGM6O95932 706 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 H2BFSP57053 126 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 LY6G5CQ5SRR4 150 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 HACD4Q5VWC8 232 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 OVCH2Q7RTZ1 564 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 BVESQ8NE79 360 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF559Q9BR84 538 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 JAM3Q9BX67 310 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 GPR174Q9BXC1 333 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 C1QTNF2Q9BXJ5 285 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 ACTR6Q9GZN1 396 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 FN3KQ9H479 309 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 CD93Q9NPY3 652 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 ST6GALNAC2Q9UJ37 374 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 NARSO43776 548 aaKnown RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 GALR3O60755 368 aaPredicted RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 PAPLNO95428 1278 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 CEBPBP17676 345 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 HTR2AP28223 471 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 GDI2P50395 445 aaKnown RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 RAG2P55895 527 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 CSNK1G2P78368 415 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 DYRK1AQ13627 763 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 TMEM44Q2T9K0 475 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF836Q6ZNA1 936 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 TMUB2Q71RG4 321 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 LINC00518Q8N0U6 118 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 ZNF454Q8N9F8 522 aa12.51□□□□□ -0.41
PCNX3-202ENST00000439247 OR1S1Q8NH92 325 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms