RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CRELD1Q96HD1 420 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 TMEM43Q9BTV4 400 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 KIF17Q9P2E2 1029 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 CHRNA9Q9UGM1 479 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 RPH3AQ9Y2J0 694 aaPredicted RBP18.75■□□□□ 0.59
CHD3-204ENST00000439235 TMED7Q9Y3B3 224 aa18.75■□□□□ 0.59
CHD3-204ENST00000439235 SUSD5O60279 629 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 ZIC3O60481 467 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 TRAPPC6AO75865 159 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 RASAL1O95294 804 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 HPNP05981 417 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 ANXA8P13928 327 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 TCEA1P23193 301 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 RFC3P40938 356 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 PTDSS1P48651 473 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 PPIAP62937 165 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 SELENBP1Q13228 472 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 LRRC36Q1X8D7 754 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 TMEM44Q2T9K0 475 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 OTUD3Q5T2D3 398 aaPredicted RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 RPUSD3Q6P087 351 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 C3orf33Q6P1S2 294 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 C5orf46Q6UWT4 87 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 HS3ST5Q8IZT8 346 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 FAM109AQ8N4B1 249 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 CBR4Q8N4T8 237 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 BARD1Q99728 777 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 RBM4BQ9BQ04 359 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 RBM4Q9BWF3 364 aaKnown RBP18.74■□□□□ 0.59
CHD3-204ENST00000439235 KLHL4Q9C0H6 718 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 TMEM5Q9Y2B1 443 aa18.74■□□□□ 0.59
CHD3-204ENST00000439235 HTR3EA5X5Y0 456 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 PDLIM1O00151 329 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 ZNF24P17028 368 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 CCNA2P20248 432 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 FKBP2P26885 142 aaKnown RBP18.73■□□□□ 0.59
CHD3-204ENST00000439235 GCKP35557 465 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 UGT2B15P54855 530 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 DAG1Q14118 895 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 ADGRG3Q86Y34 549 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 NRMQ8IXM6 262 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 PACRGLQ8N7B6 248 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 ATG16L2Q8NAA4 619 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 AQP11Q8NBQ7 271 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 OR9Q2Q8NGE9 314 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 STK35Q8TDR2 534 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 SLC25A43Q8WUT9 341 aaPredicted RBP18.73■□□□□ 0.59
CHD3-204ENST00000439235 NRG4Q8WWG1 115 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 DNAJC9Q8WXX5 260 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 MFRPQ9BY79 579 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 ZNF556Q9HAH1 456 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 MGAT4BQ9UQ53 548 aa18.73■□□□□ 0.59
CHD3-204ENST00000439235 IGKV1D-42A0A075B6H8 117 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 TMEM72A0PK05 275 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 A8MVM7 634 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 SHISA8B8ZZ34 492 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 KPNA4O00629 521 aaPredicted RBP18.72■□□□□ 0.59
CHD3-204ENST00000439235 EI24O14681 340 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 ZNF208O43345 1280 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 HPRP00739 348 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 IGF2P01344 180 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 PRKACGP22612 351 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 MAGEA5P43359 124 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 SLC6A19Q695T7 634 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 ZNF770Q6IQ21 691 aaPredicted RBP18.72■□□□□ 0.59
CHD3-204ENST00000439235 PGBD2Q6P3X8 592 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 TBPL2Q6SJ96 375 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 YRDCQ86U90 279 aaKnown RBP18.72■□□□□ 0.59
CHD3-204ENST00000439235 CDK20Q8IZL9 346 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 DDIT4LQ96D03 193 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 SFXN2Q96NB2 322 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 NPAS1Q99742 590 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 COQ10BQ9H8M1 238 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 USE1Q9NZ43 259 aa18.72■□□□□ 0.59
CHD3-204ENST00000439235 MAGED1Q9Y5V3 778 aaPredicted RBP18.72■□□□□ 0.59
CHD3-204ENST00000439235 IGF2RP11717 2491 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 OR2M5A3KFT3 312 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 LINC01387J3KSC0 135 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 SOCS2O14508 198 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 TFECO14948 347 aaPredicted RBP18.71■□□□□ 0.59
CHD3-204ENST00000439235 PIP5K1CO60331 668 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 ADAP00813 363 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 IFI30P13284 250 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 PTNP21246 168 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 CBLP22681 906 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 VHLP40337 213 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 ALDH3A2P51648 485 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 CTBP2P56545 445 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 PPP2R2BQ00005 443 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 PMP22Q01453 160 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 PRKCDQ05655 676 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 WIPI1Q5MNZ9 446 aaPredicted RBP18.71■□□□□ 0.59
CHD3-204ENST00000439235 PPP4R4Q6NUP7 873 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 FAHD1Q6P587 224 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 OR5M1Q8NGP8 315 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 PFN4Q8NHR9 129 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 GNPDA2Q8TDQ7 276 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 SLC39A7Q92504 469 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 PNPLA2Q96AD5 504 aa18.71■□□□□ 0.59
CHD3-204ENST00000439235 FEVQ99581 238 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms