RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 ZCCHC18P0CG32 403 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 HOXB9P17482 250 aaPredicted RBP12.28□□□□□ -0.44
PRAME-209ENST00000439106 TACR3P29371 465 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 APOBEC1P41238 236 aaKnown RBP12.28□□□□□ -0.44
PRAME-209ENST00000439106 STX1BP61266 288 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 EPS8Q12929 822 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 FOXD4Q12950 439 aaPredicted RBP12.28□□□□□ -0.44
PRAME-209ENST00000439106 ABLIM2Q6H8Q1 611 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 MSANTD1Q6ZTZ1 278 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 TGIF2LYQ8IUE0 185 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 FUNDC1Q8IVP5 155 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 C10orf111Q8N326 155 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 SLC43A2Q8N370 569 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 WFDC11Q8NEX6 87 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 OR52P1PQ8NH57 321 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 SLC25A43Q8WUT9 341 aaPredicted RBP12.28□□□□□ -0.44
PRAME-209ENST00000439106 SLC38A5Q8WUX1 472 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 OIT3Q8WWZ8 545 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 MAL2Q969L2 176 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 MBD6Q96DN6 1003 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 BCO1Q9HAY6 547 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 SLC25A37Q9NYZ2 338 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 CCDC167Q9P0B6 97 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 OSGIN1Q9UJX0 560 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 ZNF443Q9Y2A4 671 aaPredicted RBP12.28□□□□□ -0.44
PRAME-209ENST00000439106 TMED7Q9Y3B3 224 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 DSPPQ9NZW4 1301 aa12.28□□□□□ -0.44
PRAME-209ENST00000439106 ZC3H12DA2A288 527 aaKnown RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 FRS3O43559 492 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 SASH3O75995 380 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 IGHV3-9P01782 118 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 TFPTP0C1Z6 253 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 PRG2P13727 222 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 CD99P14209 185 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 H2AFXP16104 143 aaPredicted RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 PSMB1P20618 241 aaKnown RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 CRISP3P54108 245 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 PPP2R2AP63151 447 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 ADAM8P78325 824 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 TXNL4AP83876 142 aaKnown RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 RGNQ15493 299 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 PAGE3Q5JUK9 113 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 KRTAP1-3Q8IUG1 177 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 CCDC103Q8IW40 242 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 MSRB3Q8IXL7 192 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 CMIPQ8IY22 773 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 PEX5LQ8IYB4 626 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 PLPPR2Q96GM1 343 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 MTHFD2LQ9H903 347 aaPredicted RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 INTS9Q9NV88 658 aaKnown RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 EDARQ9UNE0 448 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 GPR52Q9Y2T5 361 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 CHST2Q9Y4C5 530 aa12.27□□□□□ -0.45
PRAME-209ENST00000439106 SPIN1Q9Y657 262 aaPredicted RBP12.27□□□□□ -0.45
PRAME-209ENST00000439106 CDHR4A6H8M9 788 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 CFAP73A6NFT4 308 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 ZNF716A6NP11 495 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 CLIC1O00299 241 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 LYZL6O75951 148 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 PMS2P2O95744 297 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 IMPDH2P12268 514 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 IL32P24001 234 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 OR3A2P47893 321 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 POLR2HP52434 150 aaKnown RBP12.26□□□□□ -0.45
PRAME-209ENST00000439106 OR2B6P58173 313 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 CSNK2A1P68400 391 aaPredicted RBP12.26□□□□□ -0.45
PRAME-209ENST00000439106 BNIP2Q12982 314 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 TAB1Q15750 504 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 LIN52Q52LA3 116 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 BEX5Q5H9J7 111 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 SFRP5Q5T4F7 317 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 BLOC1S3Q6QNY0 202 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 HDXQ7Z353 690 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 CLIP4Q8N3C7 705 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 CADM2Q8N3J6 435 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 GOLGA6L1Q8N7Z2 621 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 SPDL1Q96EA4 605 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 CCDC28BQ9BUN5 200 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 RSPO3Q9BXY4 272 aaPredicted RBP12.26□□□□□ -0.45
PRAME-209ENST00000439106 GP6Q9HCN6 339 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 FANCFQ9NPI8 374 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 SLC52A3Q9NQ40 469 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 TLN2Q9Y4G6 2542 aa12.26□□□□□ -0.45
PRAME-209ENST00000439106 ALPK2Q86TB3 2170 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 A0A096LPI6 279 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 HMGB1P1B2RPK0 211 aaPredicted RBP12.25□□□□□ -0.45
PRAME-209ENST00000439106 TGDSO95455 350 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 PPP3CBP16298 524 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 IGHV1-2P23083 117 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 NTF4P34130 210 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 ACAA2P42765 397 aaKnown RBP12.25□□□□□ -0.45
PRAME-209ENST00000439106 SLC1A3P43003 542 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 MRPL19P49406 292 aaKnown RBP12.25□□□□□ -0.45
PRAME-209ENST00000439106 HOXC5Q00444 222 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 GNA13Q14344 377 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 STK11Q15831 433 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 ACKR1Q16570 336 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 AGKQ53H12 422 aa12.25□□□□□ -0.45
PRAME-209ENST00000439106 ZNF704Q6ZNC4 412 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms