RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 OR2W5A6NFC9 320 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 UNC119BA6NIH7 251 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 POLR1CO15160 346 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 IL1AP01583 271 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 CSF2RBP32927 897 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 POU6F2P78424 691 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 TPBGQ13641 420 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 FCRLBQ6BAA4 426 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 XKRXQ6PP77 449 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 CXXC5Q7LFL8 322 aaKnown RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 PIGKQ92643 395 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 UPRTQ96BW1 309 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 PEX11GQ96HA9 241 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 ART5Q96L15 291 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 TBX5Q99593 518 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 SPRTNQ9H040 489 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 KRCC1Q9NPI7 259 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 B3GAT2Q9NPZ5 323 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 COQ3Q9NZJ6 369 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC23A1Q9UHI7 598 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 NCR1O76036 304 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 SAGP10523 405 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 EPHA8P29322 1005 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 GABRA5P31644 462 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 EVI2BP34910 448 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 SKP1P63208 163 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 DSG2Q14126 1118 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 PLET1Q6UQ28 207 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 DTX3Q8N9I9 347 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 FAM181AQ8N9Y4 354 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF485Q8NCK3 441 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 OR4N2Q8NGD1 307 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 OR52L1Q8NGH7 329 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 OR13C2Q8NGS9 318 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 SPRYD4Q8WW59 207 aaPredicted RBP12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 KATNB1Q9BVA0 655 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 HCAR1Q9BXC0 346 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 GALNT9Q9HCQ5 603 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 TEKT2Q9UIF3 430 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 SATB2Q9UPW6 733 aa12.79□□□□□ -0.36
PTCHD3-201ENST00000438700 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 BRINP1O60477 761 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 OR2B3O76000 313 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 CBX7O95931 251 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 RNH1P13489 461 aaKnown RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 ERP29P30040 261 aaKnown RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 HTR1FP30939 366 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 FAM53BQ14153 422 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 NNATQ16517 81 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 TCTE1Q5JU00 501 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 THSD4Q6ZMP0 1018 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 QSOX2Q6ZRP7 698 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 C1orf210Q8IVY1 113 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 FAM109AQ8N4B1 249 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 EDAQ92838 391 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 PTCHD1Q96NR3 888 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 STACQ99469 402 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 CHRNA10Q9GZZ6 450 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 NARFLQ9H6Q4 476 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 TNFRSF10DQ9UBN6 386 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 SUSD2Q9UGT4 822 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF223Q9UK11 482 aaPredicted RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 ADAMTS9Q9P2N4 1935 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 HRKO00198 91 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 HRO43593 1189 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 HYAL3O43820 417 aaPredicted RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 ADAM11O75078 769 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 NSA2O95478 260 aaKnown RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 SDHBP21912 280 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 GPR3P46089 330 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC9A3P48764 834 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 SLC16A1P53985 500 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 KLHL12Q53G59 568 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 EXOSC6Q5RKV6 272 aaKnown RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 KLBQ86Z14 1044 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 TOR1AIP2Q8NFQ8 470 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 OR51A7Q8NH64 312 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 CNOT9Q92600 299 aaKnown RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 CCDC74AQ96AQ1 378 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 CTHRC1Q96CG8 243 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 BPIFA2Q96DR5 249 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 MMABQ96EY8 250 aaPredicted RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 ZNF649Q9BS31 505 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 ISG20L2Q9H9L3 353 aaKnown RBP12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 MED17Q9NVC6 651 aa12.78□□□□□ -0.36
PTCHD3-201ENST00000438700 NCOR1O75376 2440 aa12.77□□□□□ -0.36
PTCHD3-201ENST00000438700 CASKO14936 926 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 HPGDSO60760 199 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 RFPL3O75679 317 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 LYPD3O95274 346 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 HMGN1P05114 100 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 BMP7P18075 431 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 CD1CP29017 333 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 ARL4DP49703 201 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 HSD11B2P80365 405 aa12.77□□□□□ -0.37
PTCHD3-201ENST00000438700 ERV3-1Q14264 604 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms