RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 FBXW10Q5XX13 1052 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 CDH24Q86UP0 819 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 DPP10Q8N608 796 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 ZHX1-C8orf76Q96EF9 292 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 POLDIP3Q9BY77 421 aaKnown RBP22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 CLEC4MQ9H2X3 399 aaPredicted RBP22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 CCDC134Q9H6E4 229 aa22.07■■□□□ 1.12
RAPGEF1-206ENST00000438647 PDZD2O15018 2839 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 C16orf97H3BN30 126 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 GPX2P18283 190 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 UGT2B10P36537 528 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 ARFIP2P53365 341 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 GUCY1A3Q02108 690 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 ZNF311Q5JNZ3 666 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 DLEU7Q6UYE1 221 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 BEND4Q6ZU67 534 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 DHDDSQ86SQ9 333 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 ADGRG3Q86Y34 549 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 TMEM38AQ9H6F2 299 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 POLQO75417 2590 aa22.06■■□□□ 1.12
RAPGEF1-206ENST00000438647 TMED7-TICAM2A0A0A6YYA0 188 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 DNPH1O43598 174 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 YES1P07947 543 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 CD1EP15812 388 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 TACR3P29371 465 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 CDK6Q00534 326 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 EXOC3L2Q2M3D2 409 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 REEP3Q6NUK4 255 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 KRT73Q86Y46 540 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 SLC35B4Q969S0 331 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 DDIT4LQ96D03 193 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 SPATA5L1Q9BVQ7 753 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 C12orf49Q9H741 205 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 BCO1Q9HAY6 547 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 OSGIN1Q9UJX0 560 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 TMED7Q9Y3B3 224 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 TESMINQ9Y4I5 508 aa22.05■■□□□ 1.12
RAPGEF1-206ENST00000438647 IGHV3-15A0A0B4J1V0 119 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 ZNF208O43345 1280 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 CYTIPO60759 359 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 PMS2P2O95744 297 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 GKN3PP0CG01 181 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 SLC6A2P23975 617 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 RASGEF1BQ0VAM2 473 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 RUNDC3AQ59EK9 446 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 WBP2NLQ6ICG8 309 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 TUSC5Q8IXB3 177 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 NFKBIDQ8NI38 313 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 CPPED1Q9BRF8 314 aaPredicted RBP22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 MED18Q9BUE0 208 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 IKZF5Q9H5V7 419 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 ZNF226Q9NYT6 803 aa22.04■■□□□ 1.12
RAPGEF1-206ENST00000438647 SMAD9O15198 467 aaKnown RBP22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 FESP07332 822 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 CCNA2P20248 432 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 ACAA2P42765 397 aaKnown RBP22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 NFYCQ13952 458 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 MTDHQ86UE4 582 aaKnown RBP22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 CLIP4Q8N3C7 705 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 ARL5BQ96KC2 179 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 ANKRD27Q96NW4 1050 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 CGREF1Q99674 301 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 PSD2Q9BQI7 771 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 KLHL4Q9C0H6 718 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 OR11A1Q9GZK7 315 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 ADAM19Q9H013 955 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 TMEM181Q9P2C4 612 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 EDARQ9UNE0 448 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 TRAPPC4Q9Y296 219 aa22.03■■□□□ 1.12
RAPGEF1-206ENST00000438647 ANKRD17O75179 2603 aaKnown RBP22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 CXCR1P25024 350 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 PRKAR1BP31321 381 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 CCKARP32238 428 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 SCARB2Q14108 478 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 RETREG3Q86VR2 466 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 C10orf111Q8N326 155 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 CADM2Q8N3J6 435 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 ZNF607Q96SK3 696 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 CHST2Q9Y4C5 530 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 SPG11Q96JI7 2443 aa22.02■■□□□ 1.12
RAPGEF1-206ENST00000438647 PPP3CBP16298 524 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 MDH1P40925 334 aaKnown RBP22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 MAPRE2Q15555 327 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 CYP51A1Q16850 503 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 CGB2Q6NT52 195 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 TFAP2EQ6VUC0 442 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 CDC20BQ86Y33 519 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 HIPK4Q8NE63 616 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 WFIKKN1Q96NZ8 548 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 KLHL28Q9NXS3 571 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 EMC3Q9P0I2 261 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 KLHL14Q9P2G3 628 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 ANGPT4Q9Y264 503 aa22.01■■□□□ 1.11
RAPGEF1-206ENST00000438647 TMEM72A0PK05 275 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 PRORSD1PA6NEY8 169 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 ZNF724A8MTY0 619 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 EIF1BO60739 113 aaKnown RBP22■■□□□ 1.11
RAPGEF1-206ENST00000438647 SERPINB7O75635 380 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 OR2B6P58173 313 aa22■■□□□ 1.11
RAPGEF1-206ENST00000438647 RBBP4Q09028 425 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms