RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 PPP1R2P41236 205 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 TUFMP49411 452 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 RGS4P49798 205 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 ERVPABLB-1P60509 514 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 RPS6P62753 249 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 IGLV3-21P80748 117 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 PUDPQ08623 228 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SRSF5Q13243 272 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 XRCC4Q13426 336 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 IL18R1Q13478 541 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SELPLGQ14242 412 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 TGIF1Q15583 401 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 TRIP10Q15642 601 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 PRR30Q53SZ7 412 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 ZNF658Q5TYW1 1059 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 PRAMEF5Q5TYX0 476 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 PRAMEF6Q5VXH4 476 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 PPP1R2P3Q6NXS1 205 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 DEGS2Q6QHC5 323 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 CBLN3Q6UW01 205 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 WASH2PQ6VEQ5 465 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SYT10Q6XYQ8 523 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 Q6ZPB1 254 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 Q7L0L9 218 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 BZW1Q7L1Q6 419 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 NLRP9Q7RTR0 991 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 TRPM8Q7Z2W7 1104 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 BIVMQ86UB2 503 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 TPRA1Q86W33 373 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 CBWD2Q8IUF1 395 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 APOBEC3FQ8IUX4 373 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 ZNF584Q8IVC4 421 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 LRRC34Q8IZ02 419 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 ZNF683Q8IZ20 524 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SYCE1Q8N0S2 351 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 FBXL16Q8N461 479 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 COMMD1Q8N668 190 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SYT14Q8NB59 555 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SPATA4Q8NEY3 305 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 STARD8Q92502 1023 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 EMG1Q92979 244 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 RPRD1AQ96P16 312 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 PANX2Q96RD6 677 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 CHP1Q99653 195 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 OMDQ99983 421 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 FEM1AQ9BSK4 669 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 GSDMCQ9BYG8 508 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 LRRC19Q9H756 370 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 KAT8Q9H7Z6 458 aaKnown RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 METTL7AQ9H8H3 244 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SGK2Q9HBY8 427 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 NEK6Q9HC98 313 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 CHRAC1Q9NRG0 131 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 ZNF275Q9NSD4 429 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 EHFQ9NZC4 300 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 IL37Q9NZH6 218 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 SEC14L3Q9UDX4 400 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 HMGXB4Q9UGU5 601 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 FOXJ3Q9UPW0 622 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 GMPPBQ9Y5P6 360 aa2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 KLF2Q9Y5W3 355 aaPredicted RBP2.82□□□□□ -1.96
LSM1P1-201ENST00000438629 TP53BP1Q12888 1972 aaPredicted RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 IGHV3-35A0A0C4DH35 117 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 C1orf232A0A0U1RR37 186 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 OR52A4PA6NMU1 304 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 HAT1O14929 419 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 RRP8O43159 456 aaKnown RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 ADAM12O43184 909 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 PPIHO43447 177 aaKnown RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CBR3O75828 277 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 NEBLO76041 1014 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 ERLIN2O94905 339 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 SLC2A10O95528 541 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CSTAP01040 98 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 OPN1LWP04000 364 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 ANXA4P09525 319 aaPredicted RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 GSTT2P0CG29 244 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 GSTT2BP0CG30 244 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 SLC35E2P0CK97 266 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 POU2F1P14859 743 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 TSPAN8P19075 237 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 FASP25445 335 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 MSNP26038 577 aaKnown RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CDH5P33151 784 aaPredicted RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 ACVR1BP36896 505 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 GRIA1P42261 906 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CBX5P45973 191 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 HTR5AP47898 357 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 POU3F4P49335 361 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 ACADVLP49748 655 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 P2RY4P51582 365 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CDH4P55283 916 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 RIPK4P57078 832 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 VBP1P61758 197 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CXCL6P80162 114 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 SERTAD2Q14140 314 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 RFTN1Q14699 578 aaPredicted RBP2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 CASP8Q14790 479 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 KIAA0040Q15053 153 aa2.81□□□□□ -1.96
LSM1P1-201ENST00000438629 UBE2V2Q15819 145 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms