RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PRSS22Q9GZN4 317 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 C6orf62Q9GZU0 229 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 LHPPQ9H008 270 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAB6CQ9H0N0 254 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 FAM234AQ9H0X4 552 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SYT4Q9H2B2 425 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 KIR3DX1Q9H7L2 352 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 DIABLOQ9NR28 239 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC17A5Q9NRA2 495 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 STARD5Q9NSY2 213 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 GPATCH2LQ9NWQ4 482 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 RHBDL2Q9NX52 303 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 IL36GQ9NZH8 169 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 UVRAGQ9P2Y5 699 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 EIF3KQ9UBQ5 218 aaKnown RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF282Q9UDV7 671 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 TINAGQ9UJW2 476 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 FBXL3Q9UKT7 428 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 PAIP2BQ9ULR5 123 aaKnown RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 FZR1Q9UM11 496 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 MYO6Q9UM54 1294 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC22A13Q9Y226 551 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 EIF3LQ9Y262 564 aaKnown RBP3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 HYOU1Q9Y4L1 999 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 OR1A2Q9Y585 309 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 WIF1Q9Y5W5 379 aa3.21□□□□□ -1.9
HMGB1P12-201ENST00000438594 ELP1O95163 1332 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CACNA1IQ9P0X4 2223 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TRBV9A0A0B4J1U6 114 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 A0A1W2PP11 408 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 A0A1W2PRD5 423 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SLC5A10A0PJK1 596 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SERINC4A6NH21 518 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 H3BNX3 289 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CLDN34H7C241 214 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 HSPB6O14558 160 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 IMPA2O14732 288 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TAPBPO15533 448 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SPINT2O43291 252 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 NDUFB4O95168 129 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RCBTB2O95199 551 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PAPSS2O95340 614 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 FARS2O95363 451 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 LDOC1O95751 146 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TSPAN13O95857 204 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 P04436 131 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 IFNW1P05000 195 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ATP1A1P05023 1023 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 LCKP06239 509 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RPS17P08708 135 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 GSTA2P09210 222 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ANXA3P12429 323 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ITGA2P17301 1181 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 GPX3P22352 226 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 DTYMKP23919 212 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRDX3P30048 256 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PIGAP37287 484 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CD79BP40259 229 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 GNPDA1P46926 289 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CSNK1A1P48729 337 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 HLCSP50747 726 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SGSHP51688 502 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 VAMP7P51809 220 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 XKP51811 444 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 NKX2-5P52952 324 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAG2P55895 527 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CLDN20P56880 219 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TAS2R38P59533 333 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 RAB4BP61018 213 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 LSM6P62312 80 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MRPS6P82932 125 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SRYQ05066 204 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SRSF1Q07955 248 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 KLRB1Q12918 225 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TRAF2Q12933 501 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 GPR50Q13585 617 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 GRB7Q14451 532 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 KPNB1Q14974 876 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ZNF77Q15935 545 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CCDC153Q494R4 210 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ACCSLQ4AC99 568 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 WASHC2DQ5SRD0 308 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 C1orf220Q5T0J3 134 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 C9orf135Q5VTT2 229 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 DMKNQ6E0U4 476 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PRMT9Q6P2P2 845 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ENPP6Q6UWR7 440 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CWC27Q6UX04 472 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM184AQ6ZMB5 413 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MOB2Q70IA6 237 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 PGAP1Q75T13 922 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ABHD13Q7L211 337 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 P4HA3Q7Z4N8 544 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 C5orf24Q7Z6I8 188 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 ANKRD37Q7Z713 158 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 CTU1Q7Z7A3 348 aaKnown RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MOB3BQ86TA1 216 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 SETD3Q86TU7 594 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 TMEM17Q86X19 198 aa3.2□□□□□ -1.9
HMGB1P12-201ENST00000438594 MB21D2Q8IYB1 491 aaPredicted RBP3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms