RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 COLEC12Q5KU26 742 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 TTC33Q6PID6 262 aaPredicted RBP12.17□□□□□ -0.46
EXT1-203ENST00000437196 POMZP3Q6PJE2 187 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 GFRALQ6UXV0 394 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 ESPNLQ6ZVH7 1005 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 CHMP1BQ7LBR1 199 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 RRM2BQ7LG56 351 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 ADGRG3Q86Y34 549 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 PAPD5Q8NDF8 572 aaKnown RBP12.17□□□□□ -0.46
EXT1-203ENST00000437196 ST6GALNAC3Q8NDV1 305 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 STK35Q8TDR2 534 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 STMN2Q93045 179 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 MED12Q93074 2177 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 EPYCQ99645 322 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 KLHDC3Q9BQ90 382 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 SLC19A3Q9BZV2 496 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 TIGARQ9NQ88 270 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 ARMC1Q9NVT9 282 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 A4GNTQ9UNA3 340 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 AP4S1Q9Y587 144 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 LIPGQ9Y5X9 500 aa12.17□□□□□ -0.46
EXT1-203ENST00000437196 MPDZO75970 2070 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 A0A1B0GTH9 108 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 A0A1W2PRQ8 180 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 SHISA8B8ZZ34 492 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 GNGT2O14610 69 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 HNRNPRO43390 633 aaKnown RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 OR2T1O43869 369 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 FKBP6O75344 327 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 H1F0P07305 194 aaKnown RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 CPN1P15169 458 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 ABOP16442 354 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 YAP1P46937 504 aaKnown RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 CRYZQ08257 329 aaKnown RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 DGCR6Q14129 220 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 PRR30Q53SZ7 412 aaPredicted RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 GDF7Q7Z4P5 450 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 OR5M1Q8NGP8 315 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 BBC3Q96PG8 261 aaPredicted RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 TIMP4Q99727 224 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 TMEM43Q9BTV4 400 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 POTEKPQ9BYX7 375 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 KLHL4Q9C0H6 718 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 DENND2DQ9H6A0 471 aaPredicted RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 NMNAT1Q9HAN9 279 aaPredicted RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 KRCC1Q9NPI7 259 aaPredicted RBP12.16□□□□□ -0.46
EXT1-203ENST00000437196 HDGFL3Q9Y3E1 203 aa12.16□□□□□ -0.46
EXT1-203ENST00000437196 NPIPA2E9PIF3 369 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 NPIPA3F8WFD2 350 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 PRRG2O14669 202 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 DEAF1O75398 565 aaPredicted RBP12.15□□□□□ -0.46
EXT1-203ENST00000437196 GADD45GO95257 159 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 CST1P01037 141 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
EXT1-203ENST00000437196 TFPIP10646 304 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 GABRA1P14867 456 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 ZNF708P17019 499 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 PTGER4P35408 488 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 LHX2P50458 406 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 CASP6P55212 293 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 CSNK2A1P68400 391 aaPredicted RBP12.15□□□□□ -0.46
EXT1-203ENST00000437196 SPIBQ01892 262 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 MFSD13AQ14CX5 517 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 SOWAHCQ53LP3 525 aaPredicted RBP12.15□□□□□ -0.46
EXT1-203ENST00000437196 OR2T5Q6IEZ7 315 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 RNF113BQ8IZP6 322 aaKnown RBP12.15□□□□□ -0.46
EXT1-203ENST00000437196 LINC00471Q8N535 108 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 OR2T29Q8NH02 315 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 SMPDL3BQ92485 455 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 KLHL15Q96M94 604 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 PRDM14Q9GZV8 571 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 REEP1Q9H902 201 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 TMCC3Q9ULS5 477 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 NBASA2RRP1 2371 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 SHANK1Q9Y566 2161 aa12.15□□□□□ -0.46
EXT1-203ENST00000437196 TMEM72A0PK05 275 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 FIGNL2A6NMB9 653 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 AHRRA9YTQ3 701 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 H0Y3Z8 333 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 J3KTA2 159 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 EIF1AYO14602 144 aaKnown RBP12.14□□□□□ -0.47
EXT1-203ENST00000437196 FFAR1O14842 300 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 DNPH1O43598 174 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 SEMA7AO75326 666 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 PRSS23O95084 383 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 AHSA1O95433 338 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 IGF2P01344 180 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 CCNA2P20248 432 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 RRM2P31350 389 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 SFTPDP35247 375 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 ERFP50548 548 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 ARHGDIAP52565 204 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 FOXK1P85037 733 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 TMEM176BQ3YBM2 270 aaPredicted RBP12.14□□□□□ -0.47
EXT1-203ENST00000437196 IQCCQ4KMZ1 466 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 LINC00114Q6XXX2 140 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 PRICKLE2Q7Z3G6 844 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 ZNF605Q86T29 641 aa12.14□□□□□ -0.47
EXT1-203ENST00000437196 ATCAYQ86WG3 371 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms