RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 METTL2AQ96IZ6 378 aaKnown RBP12.92□□□□□ -0.34
HDAC8-213ENST00000436675 FCRL1Q96LA6 429 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 OR7D2Q96RA2 312 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 SNX18Q96RF0 628 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 FMO2Q99518 471 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 LAT2Q9GZY6 243 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 CTPS2Q9NRF8 586 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 ACER3Q9NUN7 267 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 KCNE5Q9UJ90 142 aa12.92□□□□□ -0.34
HDAC8-213ENST00000436675 PDLIM1O00151 329 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 STAMBPO95630 424 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 C6orf47O95873 294 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 CSTAP01040 98 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 EGR1P18146 543 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 PGCP20142 388 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 RYKP34925 604 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 MAGEA8P43361 318 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 PRPS1P60891 318 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 ACTG1P63261 375 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 TSPO2Q5TGU0 170 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 KLHL24Q6TFL4 600 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 SYT10Q6XYQ8 523 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 LINC01356Q8N9X3 169 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 ZNF540Q8NDQ6 660 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 OR56A1Q8NGH5 318 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 SLC25A43Q8WUT9 341 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-213ENST00000436675 TMEM234Q8WY98 164 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 CCDC126Q96EE4 140 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 SDF2Q99470 211 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 MYOZ1Q9NP98 299 aaPredicted RBP12.91□□□□□ -0.34
HDAC8-213ENST00000436675 GPATCH2Q9NW75 528 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 GIMAP2Q9UG22 337 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 METRNQ9UJH8 293 aa12.91□□□□□ -0.34
HDAC8-213ENST00000436675 IGHV1-18A0A0C4DH31 117 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 SCAMP2O15127 329 aaKnown RBP12.9□□□□□ -0.34
HDAC8-213ENST00000436675 PMS2P2O95744 297 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 KRT16P08779 473 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 OR4A8P0C604 315 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 BCKDHAP12694 445 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 SOAT1P35610 550 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 HPCAL1P37235 193 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 ASMTP46597 345 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 CHN2P52757 468 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 TGFBR3Q03167 851 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 CCNIQ14094 377 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 R3HCC1LQ7Z5L2 792 aaKnown RBP12.9□□□□□ -0.34
HDAC8-213ENST00000436675 ZCCHC24Q8N2G6 241 aaKnown RBP12.9□□□□□ -0.34
HDAC8-213ENST00000436675 C17orf53Q8N3J3 647 aaPredicted RBP12.9□□□□□ -0.34
HDAC8-213ENST00000436675 ZNF563Q8TA94 476 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 OR5P2Q8WZ92 322 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 MTERF3Q96E29 417 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 KCNS3Q9BQ31 491 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 TUBB1Q9H4B7 451 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 METTL17Q9H7H0 456 aaPredicted RBP12.9□□□□□ -0.34
HDAC8-213ENST00000436675 CHRNA9Q9UGM1 479 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 TBK1Q9UHD2 729 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 ATP6V1HQ9UI12 483 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 DCTN4Q9UJW0 460 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 MKLN1Q9UL63 735 aa12.9□□□□□ -0.34
HDAC8-213ENST00000436675 B9A039 149 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 AZIN1O14977 448 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 CFLARO15519 480 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 FCMRO60667 390 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 LILRA1O75019 489 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 BCAS1O75363 584 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-213ENST00000436675 WNT11O96014 354 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 DAOP14920 347 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 SLC16A1P53985 500 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 TRIP10Q15642 601 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 ZNF572Q7Z3I7 529 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-213ENST00000436675 HMGN2P46Q86SG4 172 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 DDIASQ8IXT1 998 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 CLEC4FQ8N1N0 589 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 C17orf78Q8N4C9 275 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 C3orf56Q8N813 242 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 CCDC63Q8NA47 563 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 C1orf162Q8NEQ5 155 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-213ENST00000436675 CCDC106Q9BWC9 280 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 TSPYL1Q9H0U9 437 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 CA10Q9NS85 328 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 DCDC2Q9UHG0 476 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 FLVCR1Q9Y5Y0 555 aa12.89□□□□□ -0.35
HDAC8-213ENST00000436675 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
HDAC8-213ENST00000436675 A0A1W2PPM1 405 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 LYNX1G3V0Z9 82 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 H3BQF6 201 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 LSM1O15116 133 aaKnown RBP12.88□□□□□ -0.35
HDAC8-213ENST00000436675 DNAJA2O60884 412 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 UGT2B17O75795 530 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 SNUPNO95149 360 aaKnown RBP12.88□□□□□ -0.35
HDAC8-213ENST00000436675 PROCP04070 461 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 LYNX1P0DP58 116 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 NEFHP12036 1026 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 MPGP29372 298 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 APOBEC1P41238 236 aaKnown RBP12.88□□□□□ -0.35
HDAC8-213ENST00000436675 IDH3GP51553 393 aaPredicted RBP12.88□□□□□ -0.35
HDAC8-213ENST00000436675 CDH15P55291 814 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 TUBA1BP68363 451 aa12.88□□□□□ -0.35
HDAC8-213ENST00000436675 TUBA4AP68366 448 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms