RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RPS7P62081 194 aaKnown RBP9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF542PQ5EBM4 170 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 TMEM81Q6P7N7 255 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 KIAA1324Q6UXG2 1013 aaKnown RBP9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 TRILQ7L0X0 811 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 SSX6Q7RTT6 188 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 LNX2Q8N448 690 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 OR13C5Q8NGS8 318 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 SGTBQ96EQ0 304 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 GAS2L1Q99501 681 aaPredicted RBP9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 C12orf57Q99622 126 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 GABRG3Q99928 467 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 WACQ9BTA9 647 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 TMEM43Q9BTV4 400 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 IFT27Q9BW83 186 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 ASB6Q9NWX5 421 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 WBP1LQ9NX94 342 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 FLRT3Q9NZU0 649 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 MGAT4AQ9UM21 535 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 HRH3Q9Y5N1 445 aa9.62□□□□□ -0.87
CLSTN1-203ENST00000435891 CHST10O43529 356 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 SDHBP21912 280 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 TLX1P31314 330 aaPredicted RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF81P51508 661 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 MAP2K6P52564 334 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 CRMP1Q14194 572 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 PRICKLE4Q2TBC4 344 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 EXOSC6Q5RKV6 272 aaKnown RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 OR10Z1Q8NGY1 313 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 PEX11GQ96HA9 241 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 WDR92Q96MX6 357 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 TEAD3Q99594 435 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 PCDHB16Q9NRJ7 776 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 RBFOX1Q9NWB1 397 aaKnown RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ALG5Q9Y673 324 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 SESN1Q9Y6P5 492 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 DAPL1A0PJW8 107 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 LYRM1O43325 122 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 TNFSF14O43557 240 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 BMP7P18075 431 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ALAS2P22557 587 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 OR12D2P58182 307 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 SLC3A1Q07837 685 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 KIR2DS3Q14952 304 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ALG11Q2TAA5 492 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 DEFB110Q30KQ9 67 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 SYT9Q86SS6 491 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ARL14Q8N4G2 192 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 RADILQ96JH8 1075 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 KCNJ15Q99712 375 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ZFYVE21Q9BQ24 234 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 MS4A7Q9GZW8 240 aaPredicted RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 CDCP1Q9H5V8 836 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 EIF3KQ9UBQ5 218 aaKnown RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 EXTL2Q9UBQ6 330 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 PCOLCE2Q9UKZ9 415 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 CACNA1IQ9P0X4 2223 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 TRAV20A0A0B4J274 112 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 OR2W5A6NFC9 320 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 SGK494L7N484 410 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 HRKO00198 91 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 GNB5O14775 395 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 AGR2O95994 175 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 DBIP07108 87 aaKnown RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ACVR1BP36896 505 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 EIPR1Q53HC9 387 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 LUZP2Q86TE4 346 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF680Q8NEM1 530 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 OR52L1Q8NGH7 329 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 OR5W2Q8NH69 310 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 ELSPBP1Q96BH3 223 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 SLC22A18Q96BI1 424 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 GTPBP2Q9BX10 602 aaKnown RBP9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 JAM3Q9BX67 310 aa9.61□□□□□ -0.87
CLSTN1-203ENST00000435891 A0A1W2PPK0 400 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 ZNF98A6NK75 572 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 LRRN3E7EW58 273 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 HCN1O60741 890 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 RGS9O75916 674 aaPredicted RBP9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 PPP1R3DO95685 299 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 ATP1B1P05026 303 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 EIF4EP06730 217 aaKnown RBP9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 THBS2P35442 1172 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 TNFRSF4P43489 277 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 EMDP50402 254 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 KIAA1024LP59773 190 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 MFSD13AQ14CX5 517 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 TMEM44Q2T9K0 475 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 ZBTB37Q5TC79 503 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 GID4Q8IVV7 300 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 LRRC17Q8N6Y2 441 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 OR51L1Q8NGJ5 315 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 C4orf36Q96KX1 117 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 MRGPRX1Q96LB2 322 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 TNFRSF13CQ96RJ3 184 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 LRRN3Q9H3W5 708 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 CACYBPQ9HB71 228 aaKnown RBP9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 GALNT9Q9HCQ5 603 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 CMC2Q9NRP2 79 aa9.6□□□□□ -0.87
CLSTN1-203ENST00000435891 TDRD6O60522 2096 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms