RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 SYNDIG1Q9H7V2 258 aa6.89□□□□□ -1.31
SYNPO2-203ENST00000434046 DMRT3Q9NQL9 472 aa6.89□□□□□ -1.31
SYNPO2-203ENST00000434046 PRMT8Q9NR22 394 aaPredicted RBP6.89□□□□□ -1.31
SYNPO2-203ENST00000434046 KCMF1Q9P0J7 381 aa6.89□□□□□ -1.31
SYNPO2-203ENST00000434046 GNG8Q9UK08 70 aa6.89□□□□□ -1.31
SYNPO2-203ENST00000434046 AUP1Q9Y679 476 aa6.89□□□□□ -1.31
SYNPO2-203ENST00000434046 LAMA3Q16787 3333 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 DSPPQ9NZW4 1301 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PSMD9O00233 223 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 GAPDHSO14556 408 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CDC123O75794 336 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 SC5DO75845 299 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 NDUFV2P19404 249 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PDHA2P29803 388 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 RORAP35398 523 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ADH7P40394 386 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 SOX2P48431 317 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 HOXA1P49639 335 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 RAB13P51153 203 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 LUMP51884 338 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PCBP3P57721 371 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 UBE2IP63279 158 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PGGHGQ32M88 737 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 SLC36A2Q495M3 483 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ZNF776Q68DI1 518 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 FRRS1Q6ZNA5 592 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ZNF546Q86UE3 836 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 BEST3Q8N1M1 668 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 OR4D10Q8NGI6 311 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 OR51A7Q8NH64 312 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 NSMAFQ92636 917 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 RAB7BQ96AH8 199 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 WDR89Q96FK6 387 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 DTD2Q96FN9 168 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PRRC1Q96M27 445 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CAMK1GQ96NX5 476 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PCBD2Q9H0N5 130 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 SLITRK2Q9H156 845 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 NEUROD4Q9HD90 331 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CLDND1Q9NY35 253 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 TAAR2Q9P1P5 351 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CBLCQ9ULV8 474 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 A4GNTQ9UNA3 340 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 NTNG1Q9Y2I2 539 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 E9PI62 339 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PRICKLE3O43900 615 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 VEGFDO43915 354 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 FABP1P07148 127 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ATF1P18846 271 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ITGB8P26012 769 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 IMPA1P29218 277 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 KCNJ3P48549 501 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ART1P52961 327 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 B4GALNT1Q00973 533 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ZNF77Q15935 545 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 FAM78AQ5JUQ0 283 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ASTLQ6HA08 431 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ADIPOR2Q86V24 386 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 NR2C2APQ86WQ0 139 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 RASGRP3Q8IV61 690 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CDH26Q8IXH8 852 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 LRRC56Q8IYG6 542 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 SVBPQ8N300 66 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 TMIEQ8NEW7 156 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 BRIX1Q8TDN6 353 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 C10orf90Q96M02 699 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 DPH1Q9BZG8 443 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 MYNNQ9NPC7 610 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 DZANK1Q9NVP4 752 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 KCND3Q9UK17 655 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CAMK2AQ9UQM7 478 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 SIRT4Q9Y6E7 314 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PDCD11Q14690 1871 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 TRBV2A0A0J9YWF9 115 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 H7BY64 318 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 LINC01387J3KSC0 135 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 RPP14O95059 124 aaKnown RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 LIPCP11150 499 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 GABRA1P14867 456 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 IFNGR1P15260 489 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 FOSL1P15407 271 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 DCTDP32321 178 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PSMB10P40306 273 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 KHKP50053 298 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 RAB5BP61020 215 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 CDK5Q00535 292 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 TSPAN31Q12999 210 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 ODF4Q2M2E3 257 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 LINC00303Q3SY05 128 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 HSD17B13Q7Z5P4 300 aaPredicted RBP6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 KRT77Q7Z794 578 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 TPRA1Q86W33 373 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 GID4Q8IVV7 300 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 OR4C6Q8NH72 309 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 DUSP19Q8WTR2 217 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 LCN9Q8WX39 176 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 THAP4Q8WY91 577 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 WNT2BQ93097 391 aa6.88□□□□□ -1.31
SYNPO2-203ENST00000434046 PRAP1Q96NZ9 151 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms