RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 C19orf24Q9BVV8 132 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 PARD6BQ9BYG5 372 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 PUS3Q9BZE2 481 aaKnown RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 MAGT1Q9H0U3 335 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRC40Q9H9A6 602 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 AIPL1Q9NZN9 384 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 C6orf203Q9P0P8 240 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 COX16Q9P0S2 106 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 RPH3ALQ9UNE2 315 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 PXDNLA1KZ92 1463 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 CROCC2H7BZ55 1655 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 KIF1AQ12756 1690 aa2.37□□□□□ -2.03
HMGB1P27-201ENST00000431429 CASZ1Q86V15 1759 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 YTHDC2Q9H6S0 1430 aaKnown RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 METTL21EPA6NDL7 271 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 G3V4G9 280 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 H3BMQ9 156 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 RHBDL1O75783 438 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 GAS8-AS1O95177 125 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 TBX6O95947 436 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 PTBP1P26599 531 aaKnown RBP eCLIP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 TAGLN2P37802 199 aaKnown RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 GNPDA1P46926 289 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 HNRNPA3P51991 378 aaKnown RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 RPS14P62263 151 aaKnown RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 MRPS11P82912 194 aaKnown RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRC74AQ0VAA2 488 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC10A1Q14973 349 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 C15orf32Q32M92 178 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC25A52Q3SY17 297 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 GLYR1Q49A26 553 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 HIGD2BQ4VC39 106 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 EIPR1Q53HC9 387 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 SFT2D3Q587I9 215 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 C1orf220Q5T0J3 134 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 ATF7IP2Q5U623 682 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 METTL11BQ5VVY1 283 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 SCYL2Q6P3W7 929 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 CXCL17Q6UXB2 119 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 MYPOPQ86VE0 399 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC38A6Q8IZM9 456 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 TMEM123Q8N131 208 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 DHRSXQ8N5I4 330 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 KLHL30-AS1Q8NEE0 82 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 TRPV1Q8NER1 839 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR8J1Q8NGP2 316 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 VSIG2Q96IQ7 327 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 MTMR9Q96QG7 549 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 OR5B2Q96R09 309 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 TUBGCP2Q9BSJ2 902 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 TMEM43Q9BTV4 400 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 PAXXQ9BUH6 204 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 ELOVL4Q9GZR5 314 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 RHBGQ9H310 441 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 VCX2Q9H322 139 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 CAB39LQ9H9S4 337 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 ERVW-1Q9UQF0 538 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 AK6Q9Y3D8 172 aaKnown RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 AGRNO00468 2067 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 ABCA7Q8IZY2 2146 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 RAI1Q7Z5J4 1906 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 RGPD3A6NKT7 1758 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 RGPD4Q7Z3J3 1758 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 ROCK1Q13464 1354 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 PLEKHH1Q9ULM0 1364 aa2.36□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRK1Q38SD2 2015 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 PLCH1Q4KWH8 1693 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 NALCNQ8IZF0 1738 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRRIQ1Q96JM4 1722 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 WDR90Q96KV7 1748 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 A0A0U1RQS6 177 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 A0A1B0GWB2 263 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 LRP5LA4QPB2 252 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 TRIM64CA6NLI5 447 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 EFCAB7A8K855 629 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 NBR2O15453 112 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZNF264O43296 627 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 TPST2O60704 377 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 GPX5O75715 221 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 IL1BP01584 269 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 STSP08842 583 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC35E2P0CK97 266 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 PNMTP11086 282 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 PGAM2P15259 253 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 ZP3P21754 424 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 PCMT1P22061 227 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 RFC4P35249 363 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 CCT3P49368 545 aaKnown RBP2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 EFNB2P52799 333 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 IST1P53990 364 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 RIPPLY3P57055 190 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 TNFRSF17Q02223 184 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 TIMM50Q3ZCQ8 353 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SBK1Q52WX2 424 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SLC22A10Q63ZE4 541 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 C2orf66Q6UXQ4 117 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 BAIAP2L2Q6UXY1 529 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 SYT10Q6XYQ8 523 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 C16orf62Q7Z3J2 963 aa2.35□□□□□ -2.03
HMGB1P27-201ENST00000431429 ACOT1Q86TX2 421 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms