RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 WISP1O95388 367 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ZFP36L1Q07352 338 aaKnown RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ELOA3BQ3SY89 546 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 NXNL2Q5VZ03 156 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 POMZP3Q6PJE2 187 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 LHFPL3Q86UP9 236 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ELOA3Q8NG57 546 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ZHX1-C8orf76Q96EF9 292 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 SGTBQ96EQ0 304 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 HSPBAP1Q96EW2 488 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 WDR77Q9BQA1 342 aaPredicted RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 RXFP3Q9NSD7 469 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 H2AFY2Q9P0M6 372 aaPredicted RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 R4GN57 208 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 EXPH5Q8NEV8 1989 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 PNMA8CA0A1B0GUJ8 204 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 CPNE3O75131 537 aaKnown RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 NUDT14O95848 222 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 CLUP10909 449 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ITPKBP27987 946 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 NOS3P29474 1203 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 GRK6P43250 576 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 CD97P48960 835 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 IL11RAQ14626 422 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 KLHL12Q53G59 568 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 RPL13AP3Q6NVV1 102 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF554Q86TJ5 538 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ATG4DQ86TL0 474 aaPredicted RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ATCAYQ86WG3 371 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 PROKR2Q8NFJ6 384 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 DYNC2LI1Q8TCX1 351 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 RFKQ969G6 155 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 SEMA4CQ9C0C4 833 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 EXOSC3Q9NQT5 275 aaKnown RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 MRPS18AQ9NVS2 196 aaKnown RBP15.23■□□□□ 0.03
USHBP1-203ENST00000431146 ICAM5Q9UMF0 924 aa15.23■□□□□ 0.03
USHBP1-203ENST00000431146 TRBV11-1A0A0K0K1C0 115 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 CCRL2O00421 344 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 TPPPO94811 219 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 NADKO95544 446 aaPredicted RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 MYL12AP19105 171 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 AVPR2P30518 371 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 PNLIPRP2P54317 469 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF528Q3MIS6 628 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 C3orf38Q5JPI3 329 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 CPEB2Q7Z5Q1 589 aaKnown RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 SIRT6Q8N6T7 355 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 RELTQ969Z4 430 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 LAT2Q9GZY6 243 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 DCSTAMPQ9H295 470 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 FGF20Q9NP95 211 aaPredicted RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 CMC2Q9NRP2 79 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 QPCTLQ9NXS2 382 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 FBXL4Q9UKA2 621 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 PMF1-BGLAPU3KQ54 211 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 C2orf72A6NCS6 295 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 FAM86C2PA6NEL3 165 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 ALG1L2C9J202 215 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 MCIDASD6RGH6 385 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 SCG5P05408 212 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 TACR3P29371 465 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 HTR1FP30939 366 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 EVI2BP34910 448 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 ATP6V1E1P36543 226 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 FBXW4P57775 412 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 ZNF362Q5T0B9 420 aaPredicted RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 LIPKQ5VXJ0 399 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 THOC7Q6I9Y2 204 aaKnown RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 MRPL14Q6P1L8 145 aaKnown RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 NIPAL3Q6P499 406 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 RTL4Q6ZR62 310 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 OR51G2Q8NGK0 314 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 GATAD2BQ8WXI9 593 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 PTP4A1Q93096 173 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 ERMAPQ96PL5 475 aaPredicted RBP15.22■□□□□ 0.03
USHBP1-203ENST00000431146 OR51V1Q9H2C8 321 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 ADAM18Q9Y3Q7 739 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 PCDHGA3Q9Y5H0 932 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 NPFFR2Q9Y5X5 522 aa15.22■□□□□ 0.03
USHBP1-203ENST00000431146 LRRTM2O43300 516 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 GYPBP06028 91 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 LIMS3P0CW19 117 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 LIMS4P0CW20 117 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 SLC16A1P53985 500 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 CLDN6P56747 220 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 EGR4Q05215 589 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 CRMP1Q14194 572 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 RNLSQ5VYX0 342 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 OR5M10Q6IEU7 315 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 GHDCQ8N2G8 530 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 C10orf53Q8N6V4 93 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 SLC37A3Q8NCC5 494 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 MOGAT1Q96PD6 335 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 LPAR4Q99677 370 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 ULBP3Q9BZM4 244 aa15.21■□□□□ 0.03
USHBP1-203ENST00000431146 TMEM200CA6NKL6 621 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 PRR23D1E9PI22 279 aaPredicted RBP15.2■□□□□ 0.02
USHBP1-203ENST00000431146 FADS1O60427 444 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 ONECUT2O95948 504 aa15.2■□□□□ 0.02
USHBP1-203ENST00000431146 PRR23D2P0DMB1 279 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms