RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 LIPHQ8WWY8 451 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 HTRA1Q92743 480 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 TSLPQ969D9 159 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 KIAA1143Q96AT1 154 aaPredicted RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 OTULINQ96BN8 352 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 SHDQ96IW2 340 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 GPX7Q96SL4 187 aaPredicted RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 TMED9Q9BVK6 235 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 HOXD1Q9GZZ0 328 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 RNF32Q9H0A6 362 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 NXF5Q9H1B4 397 aaKnown RBP12.79□□□□□ -0.36
HOXC4-202ENST00000430889 C14orf119Q9NWQ9 140 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 IRAK4Q9NWZ3 460 aa12.79□□□□□ -0.36
HOXC4-202ENST00000430889 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 A0A1W2PQL4 384 aaPredicted RBP12.78□□□□□ -0.36
HOXC4-202ENST00000430889 TCRBV16S1A1N1A0A5B0 115 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 DAPL1A0PJW8 107 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 HTR3EA5X5Y0 456 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 TMEM150CB9EJG8 249 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 MCIDASD6RGH6 385 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 DVL2O14641 736 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 PPM1BO75688 479 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 SC5DO75845 299 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 OR7A10O76100 309 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 MST1P26927 711 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 OR1D4P47884 311 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 KRR1Q13601 381 aaKnown RBP12.78□□□□□ -0.36
HOXC4-202ENST00000430889 BAK1Q16611 211 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 KLHL12Q53G59 568 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 DESI1Q6ICB0 168 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 PTCRAQ6ISU1 281 aaPredicted RBP12.78□□□□□ -0.36
HOXC4-202ENST00000430889 APOOLQ6UXV4 268 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 TTLL10Q6ZVT0 673 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 CYB561A3Q8NBI2 242 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 EFHD2Q96C19 240 aaPredicted RBP12.78□□□□□ -0.36
HOXC4-202ENST00000430889 ZNF524Q96C55 264 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 ATF6BQ99941 703 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 HDHD5Q9BXW7 423 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 DUSP15Q9H1R2 295 aaPredicted RBP12.78□□□□□ -0.36
HOXC4-202ENST00000430889 OR51V1Q9H2C8 321 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 RERGLQ9H628 205 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 ERVMER34-1Q9H9K5 563 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 UBQLN4Q9NRR5 601 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 RPS6KB2Q9UBS0 482 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 KLHL21Q9UJP4 597 aa12.78□□□□□ -0.36
HOXC4-202ENST00000430889 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.77□□□□□ -0.36
HOXC4-202ENST00000430889 E9PI62 339 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 ARPC3O15145 178 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 PLPP2O43688 288 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 SSX4O60224 188 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 PRKNO60260 465 aaPredicted RBP12.77□□□□□ -0.36
HOXC4-202ENST00000430889 RGS9O75916 674 aaPredicted RBP12.77□□□□□ -0.36
HOXC4-202ENST00000430889 IFNGP01579 166 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 TFP02787 698 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 FOLR1P15328 257 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 HIST1H1CP16403 213 aaKnown RBP12.77□□□□□ -0.36
HOXC4-202ENST00000430889 CAV3P56539 151 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 DEFA1P59665 94 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 DEFA3P59666 94 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 POU4F2Q12837 409 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 SHBQ15464 509 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 FAAH2Q6GMR7 532 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 XKRXQ6PP77 449 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 DPY19L2P2Q6ZN68 376 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 GATAD2AQ86YP4 633 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 TMEM151BQ8IW70 566 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 GPALPP1Q8IXQ4 340 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 LRRC17Q8N6Y2 441 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 OR10H4Q8NGA5 316 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 NEIL3Q8TAT5 605 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 SMPDL3BQ92485 455 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 AP3S1Q92572 193 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 TXNDC15Q96J42 360 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 ERMAPQ96PL5 475 aaPredicted RBP12.77□□□□□ -0.36
HOXC4-202ENST00000430889 TMEM43Q9BTV4 400 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 NMNAT2Q9BZQ4 307 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 TBC1D17Q9HA65 648 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 NRIP3Q9NQ35 241 aa12.77□□□□□ -0.36
HOXC4-202ENST00000430889 SEC16AO15027 2179 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 RP1P56715 2156 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 UNC13CQ8NB66 2214 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 CD8B2A6NJW9 211 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 LRRN3E7EW58 273 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 GNB5O14775 395 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 BCAT2O15382 392 aaPredicted RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 UTS2O95399 124 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 MT-ND5P03915 603 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 CD8BP10966 210 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 IL7P13232 177 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 GLB1P16278 677 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 LCN1P31025 176 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 RORAP35398 523 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 RFX2P48378 723 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 MTNR1BP49286 362 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 GPLD1P80108 840 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 ELAVL1Q15717 326 aaKnown RBP12.77□□□□□ -0.37
HOXC4-202ENST00000430889 DDI2Q5TDH0 399 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 PRAMEF17Q5VTA0 474 aa12.77□□□□□ -0.37
HOXC4-202ENST00000430889 WBP2NLQ6ICG8 309 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms