RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 ETHE1O95571 254 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 OPN1LWP04000 364 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 CCL4P13236 92 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 POLR2HP52434 150 aaKnown RBP11.96□□□□□ -0.5
PTCH1-207ENST00000429896 ANKDD1AQ495B1 522 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 ABHD12BQ7Z5M8 362 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-207ENST00000429896 COMTD1Q86VU5 262 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 ZFAND2BQ8WV99 257 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM239Q8WW34 195 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM121BQ9BXQ6 578 aaPredicted RBP11.96□□□□□ -0.5
PTCH1-207ENST00000429896 LHX9Q9NQ69 397 aa11.96□□□□□ -0.5
PTCH1-207ENST00000429896 NUFIP1Q9UHK0 495 aaKnown RBP11.96□□□□□ -0.5
PTCH1-207ENST00000429896 CD97P48960 835 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 GRAMD2AQ8IUY3 354 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 FBXO27Q8NI29 283 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 PRRC1Q96M27 445 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CSF3RQ99062 836 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 TREX2Q9BQ50 279 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 FUZQ9BT04 418 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 ATG5Q9H1Y0 275 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 H0YJX3 145 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CD53P19397 219 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 ELK4P28324 431 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 PIN1Q13526 163 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 USF2Q15853 346 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 MINDY2Q8NBR6 621 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 OR4K5Q8NGD3 323 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CT55Q8WUE5 264 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 MND1Q9BWT6 205 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 LRFN1Q9P244 771 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 PPT2Q9UMR5 302 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 DENRO43583 198 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 GNAO1P09471 354 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CD22P20273 847 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 GCGRP47871 477 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 DAP3P51398 398 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 HOXC5Q00444 222 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 OR1Q1Q15612 314 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 ZBED5Q49AG3 693 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 TRAPPC6BQ86SZ2 158 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 GID4Q8IVV7 300 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CNEP1R1Q8N9A8 125 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CNOT11Q9UKZ1 510 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 K7ESF4 209 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 HOXB3P14651 431 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 EEF1A1P68104 462 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CBLBQ13191 982 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SH2D5Q6ZV89 423 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CMIPQ8IY22 773 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 OR51G2Q8NGK0 314 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SLC38A5Q8WUX1 472 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 WDR34Q96EX3 536 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SRA1Q9HD15 236 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 NUDT15Q9NV35 164 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SDK1Q7Z5N4 2213 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 NUDT7P0C024 238 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 EIF1P41567 113 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 CCDC80Q76M96 950 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 TMPRSS12Q86WS5 348 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 DNAJC22Q8N4W6 341 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SLC37A3Q8NCC5 494 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 PRMT8Q9NR22 394 aaPredicted RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SLAMF8Q9P0V8 285 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 IL20RAQ9UHF4 553 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 PRPH2P23942 346 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 PPICP45877 212 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 RHBDD2Q6NTF9 364 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 OVCH1Q7RTY7 1134 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 DPY19L4Q7Z388 723 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 OR13C3Q8NGS6 347 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 DCAF13Q9NV06 445 aaKnown RBP11.95□□□□□ -0.5
PTCH1-207ENST00000429896 P4HTMQ9NXG6 502 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 GLS2Q9UI32 602 aa11.95□□□□□ -0.5
PTCH1-207ENST00000429896 SIP14410 1827 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 C19orf67A6NJJ6 358 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 PEX14O75381 377 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 PHC1P78364 1004 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 SELPLGQ14242 412 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 GK3PQ14409 553 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 ENTPD8Q5MY95 495 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 VASH2Q86V25 355 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 DND1Q8IYX4 353 aaKnown RBP11.94□□□□□ -0.5
PTCH1-207ENST00000429896 ALDH16A1Q8IZ83 802 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 GPR87Q9BY21 358 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM9Q9P0T7 183 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 WASF3Q9UPY6 502 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 FAM166BA8MTA8 275 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 PRKCAP17252 672 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 CTXN1P60606 82 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 TMPPEQ6ZT21 453 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 SAGE2PA6NJ88 616 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 FUT1P19526 365 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 HOXA6P31267 233 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 ACVR1BP36896 505 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 AIMP2Q13155 320 aaKnown RBP11.94□□□□□ -0.5
PTCH1-207ENST00000429896 TMEM176BQ3YBM2 270 aaPredicted RBP11.94□□□□□ -0.5
PTCH1-207ENST00000429896 BCORP1Q8N888 145 aa11.94□□□□□ -0.5
PTCH1-207ENST00000429896 OR7G2Q8NG99 324 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms