RNA–Protein interactions for RNA: ENST00000429294.3

HLA-F-219, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-219ENST00000429294 AGR3Q8TD06 166 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 RHOXF2Q9BQY4 288 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 C1orf50Q9BV19 199 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 MANSC1Q9H8J5 431 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 PARPBPQ9NWS1 579 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 UPB1Q9UBR1 384 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 CHRNA9Q9UGM1 479 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 MKLN1Q9UL63 735 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 SLC35A3Q9Y2D2 325 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 HDGFL3Q9Y3E1 203 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 SLC25A15Q9Y619 301 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 ATP23Q9Y6H3 246 aa11.54□□□□□ -0.56
HLA-F-219ENST00000429294 LMX1BO60663 402 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 FCMRO60667 390 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 PMS2P2O95744 297 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 RYKP34925 604 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 CLK1P49759 484 aaKnown RBP11.53□□□□□ -0.56
HLA-F-219ENST00000429294 GZMKP49863 264 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 RPS26P62854 115 aaKnown RBP11.53□□□□□ -0.56
HLA-F-219ENST00000429294 HBA1P69905 142 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 MAD2L1Q13257 205 aaPredicted RBP11.53□□□□□ -0.56
HLA-F-219ENST00000429294 PGS1Q32NB8 556 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 ARHGAP11BQ3KRB8 267 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 UGT3A2Q3SY77 523 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 C6orf136Q5SQH8 315 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 C1QTNF12Q5T7M4 302 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 GRINAQ7Z429 371 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 KRTCAP2Q8N6L1 136 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 C10orf105Q8TEF2 133 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 HTRA1Q92743 480 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 ZNF524Q96C55 264 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 TUBGCP3Q96CW5 907 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 SLC35G5Q96KT7 338 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 MUS81Q96NY9 551 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 MALT1Q9UDY8 824 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 GIMAP2Q9UG22 337 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 FKBP7Q9Y680 259 aa11.53□□□□□ -0.56
HLA-F-219ENST00000429294 A0A096LNT2 108 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 RNF103-CHMP3A0A140T963 221 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 A0A1W2PR80 420 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 ZNF716A6NP11 495 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 HAX1O00165 279 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 EIF1BO60739 113 aaKnown RBP11.52□□□□□ -0.57
HLA-F-219ENST00000429294 UGT2B17O75795 530 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SHBGP04278 402 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 C8BP07358 591 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SRD5A1P18405 259 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 HNF1AP20823 631 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 ALDH3A1P30838 453 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 APOBEC3AP31941 199 aaPredicted RBP11.52□□□□□ -0.57
HLA-F-219ENST00000429294 THBS2P35442 1172 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SERPINB5P36952 375 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 HTR3AP46098 478 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SLC16A1P53985 500 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 OR2B6P58173 313 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 LSM11P83369 360 aaKnown RBP eCLIP11.52□□□□□ -0.57
HLA-F-219ENST00000429294 HPCAP84074 193 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SPOCK1Q08629 439 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 GABRA6Q16445 453 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 XKR7Q5GH72 579 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 KLHL24Q6TFL4 600 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 CASP12Q6UXS9 341 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 C17orf78Q8N4C9 275 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 KIF18AQ8NI77 898 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 EPS8L3Q8TE67 593 aaKnown RBP11.52□□□□□ -0.57
HLA-F-219ENST00000429294 APOPT1Q96IL0 206 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 NAA11Q9BSU3 229 aaPredicted RBP11.52□□□□□ -0.57
HLA-F-219ENST00000429294 C1QTNF6Q9BXI9 259 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 ZNF350Q9GZX5 532 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 CTPS2Q9NRF8 586 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 POLE3Q9NRF9 147 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 TMEM181Q9P2C4 612 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 KCNS2Q9ULS6 477 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 TRAPPC4Q9Y296 219 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SLC9A8Q9Y2E8 581 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 AMDHD2Q9Y303 409 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 WDR45Q9Y484 360 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 CUBNO60494 3623 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
HLA-F-219ENST00000429294 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.57
HLA-F-219ENST00000429294 SKAP2O75563 359 aaPredicted RBP11.51□□□□□ -0.57
HLA-F-219ENST00000429294 WNT11O96014 354 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 ZNF16P17020 682 aaPredicted RBP11.51□□□□□ -0.57
HLA-F-219ENST00000429294 PDLIM4P50479 330 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 PRPS1P60891 318 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 SLC35A1P78382 337 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 B3GLCTQ6Y288 498 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 RIMKLAQ8IXN7 391 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 ARFGAP2Q8N6H7 521 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 C1orf162Q8NEQ5 155 aaPredicted RBP11.51□□□□□ -0.57
HLA-F-219ENST00000429294 VPS37AQ8NEZ2 397 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 XAGE5Q8WWM1 108 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 PMM1Q92871 262 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 KCNS3Q9BQ31 491 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 PIMREGQ9BSJ6 248 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 CCDC106Q9BWC9 280 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 OR51I1Q9H343 314 aa11.51□□□□□ -0.57
HLA-F-219ENST00000429294 KCNE5Q9UJ90 142 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms