RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 MSX2P35548 267 aaPredicted RBP14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 ACAA2P42765 397 aaKnown RBP14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 CRYBA2P53672 197 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 HOXC5Q00444 222 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 LARS2Q15031 903 aaKnown RBP14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 RNF220Q5VTB9 566 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 PPP4R4Q6NUP7 873 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 MEX3BQ6ZN04 569 aaKnown RBP14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 P4HA3Q7Z4N8 544 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 CMIPQ8IY22 773 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 MEIOBQ8N635 442 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 SMYD1Q8NB12 490 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 NAXEQ8NCW5 288 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 FAM156AQ8NDB6 213 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 ZPLD1Q8TCW7 415 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF570Q96NI8 536 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 SPATA9Q9BWV2 254 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 EXOSC3Q9NQT5 275 aaKnown RBP14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 ANGPT4Q9Y264 503 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 IFT52Q9Y366 437 aa14.12□□□□□ -0.15
CLK3P2-201ENST00000427566 C7orf72A4D263 438 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 CD8B2A6NJW9 211 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 AQP12BA6NM10 295 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 DVL2O14641 736 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 MFN2O95140 757 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF17P17021 662 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 PGCP20142 388 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 PCGF2P35227 344 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 TIMP3P35625 211 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 IDH2P48735 452 aaKnown RBP14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 EPS8Q12929 822 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 POMZP3Q6PJE2 187 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 GGNQ86UU5 652 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 DHFR2Q86XF0 187 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 GRAMD2AQ8IUY3 354 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 MCEMP1Q8IX19 187 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 AQP12AQ8IXF9 295 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 C9orf106Q8NAJ2 232 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 REXO5Q96IC2 774 aaKnown RBP14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 LRGUKQ96M69 825 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 PCDHAC1Q9H158 963 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 CALHM2Q9HA72 323 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 ACTR3BQ9P1U1 418 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF232Q9UNY5 417 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 LRCH1Q9Y2L9 728 aa14.11□□□□□ -0.15
CLK3P2-201ENST00000427566 MBD3L4A6NDZ8 208 aaPredicted RBP14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 MBD3L3A6NE82 208 aaPredicted RBP14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 MBD3L5A6NJ08 208 aaPredicted RBP14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 ETV2O00321 342 aaPredicted RBP14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 CEACAM8P31997 349 aaPredicted RBP14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 LIPEQ05469 1076 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 DUSP7Q16829 419 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 SLC25A53Q5H9E4 307 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 LCN8Q6JVE9 175 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 ATP6V1C2Q8NEY4 427 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 MBD3L2Q8NHZ7 208 aaPredicted RBP14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF563Q8TA94 476 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF607Q96SK3 696 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 PRR14Q9BWN1 585 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 KLHL4Q9C0H6 718 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 AP3M1Q9Y2T2 418 aa14.1□□□□□ -0.15
CLK3P2-201ENST00000427566 FAM220BPB1ANY3 271 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 LINC01387J3KSC0 135 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 RPSAP08865 295 aaKnown RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 TMIGD3P0DMS9 266 aaPredicted RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 SLC7A1P30825 629 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 PRKAR1BP31321 381 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 SFTPDP35247 375 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF136P52737 540 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 RAC1P63000 192 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 MERTKQ12866 999 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 TRIP10Q15642 601 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 BCL2A1Q16548 175 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 SGCBQ16585 318 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 CTU2Q2VPK5 515 aaKnown RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 SLC25A35Q3KQZ1 300 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 OGFRL1Q5TC84 451 aaPredicted RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 DHRS4L2Q6PKH6 230 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 PLEKHM3Q6ZWE6 761 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 KRT73Q86Y46 540 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 ARMC8Q8IUR7 673 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 GCNT2Q8N0V5 402 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 LILRA2Q8N149 483 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 RELL2Q8NC24 303 aaPredicted RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 OR2T12Q8NG77 320 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 GPR32P1Q8NGA4 272 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 TAMM41Q96BW9 452 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 INTS12Q96CB8 462 aaKnown RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 ZNF845Q96IR2 970 aaPredicted RBP14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 MRGPRX4Q96LA9 322 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 TM9SF2Q99805 663 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 PINK1Q9BXM7 581 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 ALG2Q9H553 416 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 CTPS2Q9NRF8 586 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 ACER3Q9NUN7 267 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 RIMS3Q9UJD0 308 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 AP4B1Q9Y6B7 739 aa14.09□□□□□ -0.15
CLK3P2-201ENST00000427566 NBPF19A0A087WUL8 3843 aa14.08□□□□□ -0.15
CLK3P2-201ENST00000427566 PKDREJQ9NTG1 2253 aa14.08□□□□□ -0.16
CLK3P2-201ENST00000427566 A0A0J9YW62 118 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms