RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 KRTAP1-4P0C5Y4 121 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CD1EP15812 388 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TBXA2RP21731 343 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 UQCRC2P22695 453 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 GABRR1P24046 479 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ANXA13P27216 316 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CHI3L1P36222 383 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 IFNAR2P48551 515 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CBX1P83916 185 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CNTN2Q02246 1040 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF45Q02386 682 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 MXD4Q14582 209 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF79Q15937 498 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 AANATQ16613 207 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TRIM16LQ309B1 348 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CFAP221Q4G0U5 840 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 LCE3AQ5TA76 89 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF544Q6NX49 715 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 FAM199XQ6PEV8 388 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CES3Q6UWW8 571 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ARCQ7LC44 396 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TPRA1Q86W33 373 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 SKA3Q8IX90 412 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 DHRSXQ8N5I4 330 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CLDN19Q8N6F1 224 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ALLCQ8N6M5 410 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 OR10A7Q8NGE5 316 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 OR2A12Q8NGT7 310 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 OR9A1PQ8NGU1 263 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TCTEX1D2Q8WW35 142 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 MAIP1Q8WWC4 291 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 SLC5A11Q8WWX8 675 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 RAPGEF5Q92565 580 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 RPL3LQ92901 407 aaKnown RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 PHYHIPLQ96FC7 376 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 C16orf74Q96GX8 76 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CELF6Q96J87 481 aaKnown RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 SMIM14Q96QK8 99 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF607Q96SK3 696 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 MCHR1Q99705 422 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CITED1Q99966 193 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 NICN1Q9BSH3 213 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 EDEM2Q9BV94 578 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TEX13BQ9BXU2 312 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CHIAQ9BZP6 476 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 EHD1Q9H4M9 534 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF385DQ9H6B1 395 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 RMND5AQ9H871 391 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF702PQ9H963 129 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 MEAF6Q9HAF1 191 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 SLC17A5Q9NRA2 495 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 IL17CQ9P0M4 197 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 EPS15L1Q9UBC2 864 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 RNF14Q9UBS8 474 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 BLOC1S6Q9UL45 172 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 UBQLN1Q9UMX0 589 aaKnown RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CA5BQ9Y2D0 317 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF256Q9Y2P7 627 aaPredicted RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 SETD1AO15047 1707 aaKnown RBP1.76□□□□□ -2.13
PTPRC-208ENST00000427110 TMEM131LA2VDJ0 1609 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 UGGT1Q9NYU2 1555 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 ABCC3O15438 1527 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 AGLP35573 1532 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 NEXMIFQ5QGS0 1516 aa1.76□□□□□ -2.13
PTPRC-208ENST00000427110 CD109Q6YHK3 1445 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 MAP2P11137 1827 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 KIF20BQ96Q89 1820 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 KIF13AQ9H1H9 1805 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 EIF3AQ14152 1382 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 KNDC1Q76NI1 1749 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 FRMPD4Q14CM0 1322 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 IGHV7-81A0A0B4J1V7 117 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 A0A1W2PNV4 684 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 VSTM2BA6NLU5 285 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PP2D1A8MPX8 630 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ZNF705EA8MWA4 302 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 H0YCG3 227 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 K7ENP7 123 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PRKYO43930 277 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 HCN1O60741 890 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TBX19O60806 448 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 SLITRK3O94933 977 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ADCY5O95622 1261 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 GNA14O95837 355 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 RNH1P13489 461 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PRG2P13727 222 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 CPN1P15169 458 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 IGLL1P15814 213 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 GCFC2P16383 781 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 TPSB2P20231 275 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 NT5EP21589 574 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 ADSSP30520 456 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 FGF9P31371 208 aaPredicted RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 YWHABP31946 246 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 RDXP35241 583 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 RBMXP38159 391 aaKnown RBP1.75□□□□□ -2.13
PTPRC-208ENST00000427110 LEPP41159 167 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PRPHP41219 470 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 KIR2DS2P43631 304 aa1.75□□□□□ -2.13
PTPRC-208ENST00000427110 PRKXP51817 358 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms