RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ATG4DQ86TL0 474 aaPredicted RBP10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ARFGAP2Q8N6H7 521 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C1orf162Q8NEQ5 155 aaPredicted RBP10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OR7A2PQ8NGA2 310 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TWIST2Q8WVJ9 160 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 FBXO17Q96EF6 278 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 DUSP26Q9BV47 211 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 QRSL1Q9H0R6 528 aaKnown RBP10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RAB1BQ9H0U4 201 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TMEM181Q9P2C4 612 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PRDM4Q9UKN5 801 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 DNAJC15Q9Y5T4 150 aa10.79□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RAI1Q7Z5J4 1906 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ETV2O00321 342 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PGRP06401 933 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 IGHV4-31P0DP07 118 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 KRT4P19013 534 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RYKP34925 604 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RNF144AP50876 292 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 UBE2NP61088 152 aaKnown RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NDUFAF6Q330K2 333 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ARHGAP11BQ3KRB8 267 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 EXOSC6Q5RKV6 272 aaKnown RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 KANK2Q63ZY3 851 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C11orf71Q6IPW1 123 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C10orf107Q8IVU9 208 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 RFLNBQ8N5W9 214 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 POMGNT2Q8NAT1 580 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PSMA8Q8TAA3 256 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 XAGE5Q8WWM1 108 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ZNF75CPQ92670 426 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C3orf49Q96BT1 292 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 COQ8BQ96D53 544 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 ARL5BQ96KC2 179 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C16orf45Q96MC5 204 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 C12orf65Q9H3J6 166 aaKnown RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 OBP2BQ9NPH6 170 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 SIRT3Q9NTG7 399 aaPredicted RBP10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 TMEM45AQ9NWC5 275 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 NPAP1Q9NZP6 1156 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MALT1Q9UDY8 824 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 MKLN1Q9UL63 735 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 WDR45Q9Y484 360 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 PCDHB14Q9Y5E9 798 aa10.78□□□□□ -0.68
HLA-DQB3-203ENST00000425319 A0A1W2PR80 420 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR6C65A6NJZ3 312 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 B9A039 149 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PIP5K1BO14986 540 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OIP5O43482 229 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TCF21O43680 179 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NPHS1O60500 1241 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLU7O95391 586 aaKnown RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ZNF16P17020 682 aaPredicted RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MPGP29372 298 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SERPINB5P36952 375 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SERPINF1P36955 418 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NR4A2P43354 598 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC16A1P53985 500 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KRTAP24-1Q3LI83 254 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 FAM120AOSQ5T036 256 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ANXA8L1Q5VT79 327 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IL23RQ5VWK5 629 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TMEM225Q6GV28 225 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NOA1Q8NC60 698 aaKnown RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR2T11Q8NH01 316 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 UBLCP1Q8WVY7 318 aaPredicted RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 HTRA1Q92743 480 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TUBGCP3Q96CW5 907 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC35G5Q96KT7 338 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GATA5Q9BWX5 397 aaPredicted RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 TAPBPLQ9BX59 468 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CACYBPQ9HB71 228 aaKnown RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC17A5Q9NRA2 495 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GPATCH2Q9NW75 528 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ING1Q9UK53 422 aaPredicted RBP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 EMCNQ9ULC0 261 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 KCNE3Q9Y6H6 103 aa10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
HLA-DQB3-203ENST00000425319 NPIPB9F8W1W9 429 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 UGT2B17O75795 530 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 H6PDO95479 791 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GUSBP08236 651 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CDH2P19022 906 aaPredicted RBP10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CCNA2P20248 432 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ECHS1P30084 290 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SLC1A3P43003 542 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SKP2Q13309 424 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 GPAT3Q53EU6 434 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 ABLIM2Q6H8Q1 611 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SEZ6L2Q6UXD5 910 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 C12orf54Q6X4T0 127 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 AAED1Q7RTV5 226 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR5D16Q8NGK9 328 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 OR5AK3PQ8NH89 298 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 SF3B5Q9BWJ5 86 aaKnown RBP10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 DPY30Q9C005 99 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 PIF1Q9H611 641 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 CTPS2Q9NRF8 586 aa10.76□□□□□ -0.69
HLA-DQB3-203ENST00000425319 MOKQ9UQ07 419 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms