RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 AGR3Q8TD06 166 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 TMEM158Q8WZ71 300 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 APOPT1Q96IL0 206 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 CTPS2Q9NRF8 586 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 ASIC5Q9NY37 505 aa13.15□□□□□ -0.3
ATG4B-209ENST00000425239 AK1P00568 194 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 PGCP20142 388 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 ZNF83P51522 516 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 CCR4P51679 360 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 NUDT6P53370 316 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 SLC25A3Q00325 362 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 EMX2Q04743 252 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 MST1LQ2TV78 715 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 OR4F3Q6IEY1 312 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 EIF3MQ7L2H7 374 aaKnown RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 TMCO5AQ8N6Q1 288 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 FNDC5Q8NAU1 212 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 OR52E4Q8NGH9 312 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 C10orf105Q8TEF2 133 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 SLC25A43Q8WUT9 341 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 OIT3Q8WWZ8 545 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 ADAD1Q96M93 576 aaKnown RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 PRPF18Q99633 342 aaKnown RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 OR11A1Q9GZK7 315 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 EML4Q9HC35 981 aaKnown RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 SERINC1Q9NRX5 453 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 TAS2R16Q9NYV7 291 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 CDC42EP3Q9UKI2 254 aa13.14□□□□□ -0.31
ATG4B-209ENST00000425239 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
ATG4B-209ENST00000425239 CLDN24A6NM45 220 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 VWC2LB2RUY7 222 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 RNASET2O00584 256 aaKnown RBP13.13□□□□□ -0.31
ATG4B-209ENST00000425239 ANKRD28O15084 1053 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CFLARO15519 480 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 DNPH1O43598 174 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 KIAA0513O60268 411 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CYP7B1O75881 506 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 F12P00748 615 aaPredicted RBP13.13□□□□□ -0.31
ATG4B-209ENST00000425239 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CREB1P16220 341 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CLK1P49759 484 aaKnown RBP13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CASP9P55211 416 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CHRNEQ04844 493 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 SWI5Q1ZZU3 235 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 KRTAP24-1Q3LI83 254 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 ZNF544Q6NX49 715 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 EMBQ6PCB8 327 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 BHLHB9Q6PI77 547 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 SLC22A25Q6T423 547 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 FRRS1Q6ZNA5 592 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 OR8J2Q8NGG1 315 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 BOD1Q96IK1 185 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 INPP5KQ9BT40 448 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 OR51I1Q9H343 314 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 ASB6Q9NWX5 421 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 EMC3Q9P0I2 261 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 CHRNA9Q9UGM1 479 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 TRAPPC4Q9Y296 219 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 HDGFL3Q9Y3E1 203 aa13.13□□□□□ -0.31
ATG4B-209ENST00000425239 OR12D1P0DN82 309 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 IGHV4-31P0DP07 118 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 IMPDH2P12268 514 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 SLC25A16P16260 332 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 THBS2P35442 1172 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 SERPINB5P36952 375 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 ETV4P43268 484 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 RAB35Q15286 201 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 SMU1Q2TAY7 513 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 OR7E24Q6IFN5 339 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 CLEC2AQ6UVW9 174 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 GRINAQ7Z429 371 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 FBXL14Q8N1E6 418 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 UBE2J2Q8N2K1 259 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 ARIH2OSQ8N7S6 290 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 ZIC4Q8N9L1 334 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 KIF18AQ8NI77 898 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 PROX1Q92786 737 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 RAB8BQ92930 207 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 ARL8AQ96BM9 186 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 DNAJA3Q96EY1 480 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 C1QTNF6Q9BXI9 259 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 MANSC1Q9H8J5 431 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
ATG4B-209ENST00000425239 SLC7A10Q9NS82 523 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 FLVCR1Q9Y5Y0 555 aa13.12□□□□□ -0.31
ATG4B-209ENST00000425239 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.11□□□□□ -0.318e-8■■■■■ 33.7
ATG4B-209ENST00000425239 RNF103-CHMP3A0A140T963 221 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 CIB4A0PJX0 185 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 GPR171O14626 319 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SPAG7O75391 227 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 MRPL33O75394 65 aaKnown RBP13.11□□□□□ -0.31
ATG4B-209ENST00000425239 SKAP2O75563 359 aaPredicted RBP13.11□□□□□ -0.31
ATG4B-209ENST00000425239 LY6HO94772 140 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 FKBP2P26885 142 aaKnown RBP13.11□□□□□ -0.31
ATG4B-209ENST00000425239 FABP6P51161 128 aa13.11□□□□□ -0.31
ATG4B-209ENST00000425239 EFNA4P52798 201 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms