RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TBX5Q99593 518 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 GSDMCQ9BYG8 508 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 TRIM2Q9C040 744 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 SPRTNQ9H040 489 aaPredicted RBP14.05□□□□□ -0.16
C9orf3-204ENST00000424143 PPA2Q9H2U2 334 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 LYRM4Q9HD34 91 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 PRSS16Q9NQE7 514 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 C20orf141Q9NUB4 165 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 KLHL9Q9P2J3 617 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 ETV7Q9Y603 341 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 COL4A2P08572 1712 aa14.05□□□□□ -0.16
C9orf3-204ENST00000424143 A0A0B4J2E0 115 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 A0A1B0GX12 115 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 A0A1W2PPL8 197 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ZC3H12DA2A288 527 aaKnown RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 URADA6NGE7 173 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 HMSDA8MTL9 139 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 AIPO00170 330 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 KRT33AO76009 404 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CPMP14384 443 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ZP3P21754 424 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 PTGER1P34995 402 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ACVR1BP36896 505 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CCR6P51684 374 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 SRP54P61011 504 aaKnown RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 BTN3A2P78410 334 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 OPCMLQ14982 345 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 SUZ12Q15022 739 aaKnown RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 POU4F3Q15319 338 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 DCST2Q5T1A1 773 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 LINC00114Q6XXX2 140 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 GLDNQ6ZMI3 551 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 PRSS42Q7Z5A4 293 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 VN1R4Q7Z5H5 301 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CMTM4Q8IZR5 234 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 OR13C2Q8NGS9 318 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 OR14A16Q8NHC5 309 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ZFP3Q96NJ6 502 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CNN2Q99439 309 aaKnown RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 OR51V1Q9H2C8 321 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 XKR8Q9H6D3 395 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 LIN7BQ9HAP6 207 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 GPN1Q9HCN4 374 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 KLHL1Q9NR64 748 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 THAP10Q9P2Z0 257 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 COLEC10Q9Y6Z7 277 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ANKRD20A5PA0PJZ0 165 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 OR2M5A3KFT3 312 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 MEN1O00255 615 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 TNFSF14O43557 240 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 B3GALNT1O75752 331 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 RGS11O94810 467 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 HPXP02790 462 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CEBPBP17676 345 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ZNF10P21506 573 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 DPP4P27487 766 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 DIO1P49895 249 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 ERVFC1P60507 584 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 TCEAL5Q5H9L2 206 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 TJAP1Q5JTD0 557 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 FAM199XQ6PEV8 388 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 UBE2Q1Q7Z7E8 422 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 BMPERQ8N8U9 685 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 SLC22A18Q96BI1 424 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CD93Q9NPY3 652 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 MEPEQ9NQ76 525 aaPredicted RBP14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 PIPOXQ9P0Z9 390 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 CHRNA9Q9UGM1 479 aa14.04□□□□□ -0.16
C9orf3-204ENST00000424143 hCG_1807616A0A1W2PRN6 198 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 BRINP1O60477 761 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 MT-ND4P03905 459 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 ZNF250P15622 560 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 ENPP1P22413 925 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 NOS3P29474 1203 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 DRD3P35462 400 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 FHL1Q13642 323 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 AGBL4Q5VU57 503 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 KCTD20Q7Z5Y7 419 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 FTMTQ8N4E7 242 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 GALNT11Q8NCW6 608 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 OR4D9Q8NGE8 314 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 ZNF671Q8TAW3 534 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 LGALS14Q8TCE9 139 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 CA5BQ9Y2D0 317 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 SLC22A7Q9Y694 548 aa14.03□□□□□ -0.16
C9orf3-204ENST00000424143 A0A1B0GVC2 190 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 GXYLT2A0PJZ3 443 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 A6NIN4 97 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 IFITM5A6NNB3 132 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 HIDE1A8MVS5 230 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 CDK2AP1O14519 115 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 ARPC3O15145 178 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 MID1O15344 667 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 B3GALT2O43825 422 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 IGF2P01344 180 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 CEACAM5P06731 702 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 HOXC4P09017 264 aaPredicted RBP14.02□□□□□ -0.16
C9orf3-204ENST00000424143 NAGAP17050 411 aa14.02□□□□□ -0.16
C9orf3-204ENST00000424143 CTRB1P17538 263 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms