RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 C6orf203Q9P0P8 240 aaPredicted RBP15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 PRRC2AP48634 2157 aaKnown RBP15.86■□□□□ 0.13
SBDSP1-202ENST00000423945 TMED7-TICAM2A0A0A6YYA0 188 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 A0A0G2JPF8 293 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 A0A1W2PP18 115 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 TMEM72A0PK05 275 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 CFAP73A6NFT4 308 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 HNRNPCL2B2RXH8 293 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF814B7Z6K7 855 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 HNRNPCL3B7ZW38 293 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 HNRNPCL1O60812 293 aaKnown RBP15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 GCM2O75603 506 aaPredicted RBP15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 YES1P07947 543 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 THBS1P07996 1170 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 HNRNPCL4P0DMR1 293 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 PRG2P13727 222 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 CCNA2P20248 432 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 CRYGSP22914 178 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 TACR3P29371 465 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 IRX1P78414 480 aaPredicted RBP15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 LIN52Q52LA3 116 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 TMEM201Q5SNT2 666 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 RNF220Q5VTB9 566 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 ABLIM2Q6H8Q1 611 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 BEND4Q6ZU67 534 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 SLC43A2Q8N370 569 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 MED18Q9BUE0 208 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 ADAM19Q9H013 955 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 CCM2LQ9NUG4 571 aaPredicted RBP15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 THUMPD1Q9NXG2 353 aaKnown RBP15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 PLEKHA6Q9Y2H5 1048 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 TMED7Q9Y3B3 224 aa15.85■□□□□ 0.13
SBDSP1-202ENST00000423945 RAI1Q7Z5J4 1906 aaPredicted RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 ZC3H12DA2A288 527 aaKnown RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF716A6NP11 495 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 SULT2B1O00204 365 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 CASKO14936 926 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 RAMP1O60894 148 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 ARAFP10398 606 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 TFPIP10646 304 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 NCF2P19878 526 aaPredicted RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 SLC1A3P43003 542 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 POLR2HP52434 150 aaKnown RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 RASGEF1BQ0VAM2 473 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 GNA13Q14344 377 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 PRAMEF8Q5VWM4 474 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 PRAMEF7Q5VXH5 474 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 CGB2Q6NT52 195 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 PAMR1Q6UXH9 720 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 SPNS3Q6ZMD2 512 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 RETREG3Q86VR2 466 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 GABRG1Q8N1C3 465 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 NINJ1Q92982 152 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 ZNF775Q96BV0 537 aaPredicted RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 ZC3HAV1LQ96H79 300 aaKnown RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 SPATA9Q9BWV2 254 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 RAD21L1Q9H4I0 556 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 HDGFL3Q9Y3E1 203 aa15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 SPIN1Q9Y657 262 aaPredicted RBP15.84■□□□□ 0.13
SBDSP1-202ENST00000423945 MAP1AP78559 2803 aaPredicted RBP15.83■□□□□ 0.13
SBDSP1-202ENST00000423945 UQCRHLA0A096LP55 91 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF208O43345 1280 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 PGM3O95394 542 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 PMS2P2O95744 297 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 IMPDH2P12268 514 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 GPX2P18283 190 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 PSMB1P20618 241 aaKnown RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 HTR3AP46098 478 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 CLK1P49759 484 aaKnown RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 ART1P52961 327 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 FBXW10Q5XX13 1052 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 SERPINA11Q86U17 422 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 MTDHQ86UE4 582 aaKnown RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 COMTD1Q86VU5 262 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 CXorf67Q86X51 503 aaPredicted RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF440Q8IYI8 595 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 NFKBIDQ8NI38 313 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 HS3ST6Q96QI5 342 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 CPPED1Q9BRF8 314 aaPredicted RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 KLHL9Q9P2J3 617 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 PRSS50Q9UI38 385 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 ITPR3Q14573 2671 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 MED13LQ71F56 2210 aa15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF469Q96JG9 3925 aaPredicted RBP15.83■□□□□ 0.12
SBDSP1-202ENST00000423945 IGKV3D-15A0A087WSY6 115 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 A0A0G2JND7 137 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 ZNF724A8MTY0 619 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 FRS3O43559 492 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 ATE1O95260 518 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 NTF4P34130 210 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 OR3A2P47893 321 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 CSNK2A1P68400 391 aaPredicted RBP15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 H3F3AP84243 136 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 SELPLGQ14242 412 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 LARS2Q15031 903 aaKnown RBP15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 TSC22D1Q15714 1073 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 ADRM1Q16186 407 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 RUNDC3AQ59EK9 446 aa15.82■□□□□ 0.12
SBDSP1-202ENST00000423945 STK32CQ86UX6 486 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms