RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 BAIAP2L1Q9UHR4 511 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 FBXO9Q9UK97 447 aaPredicted RBP14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 HDGFL3Q9Y3E1 203 aa14.58□□□□□ -0.08
CHCHD3-202ENST00000423635 TMEM89A2RUT3 159 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 CRCPO75575 148 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 KRT16P08779 473 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 EFNA1P20827 205 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 PCMT1P22061 227 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 APEX1P27695 318 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 MAGEA8P43361 318 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 CCT3P49368 545 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 CLK1P49759 484 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 IDH3GP51553 393 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 DVL1P1P54792 670 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 ZNF141Q15928 474 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 RFTN2Q52LD8 501 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 PDZK1Q5T2W1 519 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 C9orf135Q5VTT2 229 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 R3HCC1LQ7Z5L2 792 aaKnown RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 C3orf56Q8N813 242 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 ARL5BQ96KC2 179 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 CCDC106Q9BWC9 280 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 ATP6V1HQ9UI12 483 aa14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 FAF1Q9UNN5 650 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 SPIN1Q9Y657 262 aaPredicted RBP14.57□□□□□ -0.08
CHCHD3-202ENST00000423635 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 G3V2L1 256 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 SLU7O95391 586 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 GSTA1P08263 222 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 TFPIP10646 304 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 DDX5P17844 614 aaKnown RBP14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 PGCP20142 388 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 PAX7P23759 505 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 GCAP28676 217 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 MPGP29372 298 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 ASMTP46597 345 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 ADIPOQQ15848 244 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 TSPO2Q5TGU0 170 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 RNF165Q6ZSG1 346 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 FRMD7Q6ZUT3 714 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 OR56A1Q8NGH5 318 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 OR2T11Q8NH01 316 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 CLHC1Q8NHS4 586 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 NEU4Q8WWR8 484 aaPredicted RBP14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 OBP2BQ9NPH6 170 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 CHRNA9Q9UGM1 479 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 KCNE5Q9UJ90 142 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 TRAPPC4Q9Y296 219 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 TMED5Q9Y3A6 229 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 FLVCR1Q9Y5Y0 555 aa14.56□□□□□ -0.08
CHCHD3-202ENST00000423635 IGHV1-18A0A0C4DH31 117 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 ANKRD28O15084 1053 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 SNUPNO95149 360 aaKnown RBP14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 OR4A8P0C604 315 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 DAOP14920 347 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 CASP12Q6UXS9 341 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 SPATA19Q7Z5L4 167 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 ZNF786Q8N393 782 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 ACMSDQ8TDX5 336 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 OR5P2Q8WZ92 322 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 KATNB1Q9BVA0 655 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 CTPS2Q9NRF8 586 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 DCDC2Q9UHG0 476 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 SLC9A8Q9Y2E8 581 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 PTGDR2Q9Y5Y4 395 aa14.55□□□□□ -0.08
CHCHD3-202ENST00000423635 UGT2B17O75795 530 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 CYP7B1O75881 506 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 CSTAP01040 98 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 DNAJB13P59910 316 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 TP53BP2Q13625 1128 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 RIN1Q13671 783 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 AP1ARQ63HQ0 302 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 CLEC6AQ6EIG7 209 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 KLHL24Q6TFL4 600 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 ZYG11AQ6WRX3 759 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 ADGRG3Q86Y34 549 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 FAM216AQ8WUB2 273 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 SLC38A2Q96QD8 506 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 OR7D2Q96RA2 312 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 SAP130Q9H0E3 1048 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 METTL17Q9H7H0 456 aaPredicted RBP14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 EMCNQ9ULC0 261 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 PCDHB14Q9Y5E9 798 aa14.54□□□□□ -0.08
CHCHD3-202ENST00000423635 NUP214P35658 2090 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 EXOC1LA0A1B0GW35 172 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 FAM157AC9JC47 383 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 KLF11O14901 512 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 LSM1O15116 133 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 FCMRO60667 390 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 EIF1BO60739 113 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 CRYAAP02489 173 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 UBTFL6P0CB48 400 aaPredicted RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 MYL2P10916 166 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 LAMP1P11279 417 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 NEFHP12036 1026 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 BCKDHAP12694 445 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 PGM1P36871 562 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 KHKP50053 298 aa14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 RPL38P63173 70 aaKnown RBP14.53□□□□□ -0.08
CHCHD3-202ENST00000423635 ACTG1P63261 375 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms