RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 HSD17B11Q8NBQ5 300 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 OR4D6Q8NGJ1 314 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 OR10X1Q8NGY0 326 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SYNPRQ8TBG9 265 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ACTRT1Q8TDG2 376 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 RNF183Q96D59 192 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ARSGQ96EG1 525 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 UHRF2Q96PU4 802 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ULBP2Q9BZM5 246 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 SAYSD1Q9NPB0 183 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 DNAJB9Q9UBS3 223 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 XPO7Q9UIA9 1087 aaKnown RBP3.26□□□□□ -1.89
TOP2A-201ENST00000423485 VDAC3Q9Y277 283 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 PRELID3BQ9Y3B1 194 aa3.26□□□□□ -1.89
TOP2A-201ENST00000423485 ATMINO43313 823 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 XRCC2O43543 280 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 LCMT2O60294 686 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NOS1APO75052 506 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 C1QL1O75973 258 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CELA3AP09093 270 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GATA3P23771 443 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GABRB3P28472 473 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ARSEP51690 589 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 AGFG1P52594 562 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TPTEP56180 551 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 RAB38P57729 211 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GNGT1P63211 74 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 RAB6CQ53S08 254 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TMIGD1Q6UXZ0 262 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TRMT10CQ7L0Y3 403 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OVCH1Q7RTY7 1134 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TMPRSS9Q7Z410 1059 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FGD2Q7Z6J4 655 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KLBQ86Z14 1044 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 EPHX4Q8IUS5 362 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CMTM1Q8IZ96 169 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OR7G1Q8NGA0 311 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OR4A15Q8NGL6 344 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 DGCR14Q96DF8 476 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CERS2Q96G23 380 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MBOAT4Q96T53 435 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SMAD5Q99717 465 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FNDC11Q9BVV2 318 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 RAB6CQ9H0N0 254 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MTG2Q9H4K7 406 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLA2Q9H6Q3 261 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TMEM185BQ9H7F4 350 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 WDR54Q9H977 334 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 RDH8Q9NYR8 311 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLC17A7Q9P2U7 560 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 LGALS13Q9UHV8 139 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MAN1B1Q9UKM7 699 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ACOT9Q9Y305 439 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PHF3Q92576 2039 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TICRRQ7Z2Z1 1910 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 LOC101059948A0A1B0GTJ6 334 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NKX2-6A6NCS4 301 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 NR5A2O00482 541 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 STX16O14662 325 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ANGPTL7O43827 346 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PRAMEF11O60813 436 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CSTAP01040 98 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PGRP06401 933 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FGF3P11487 239 aaPredicted RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ATF6P18850 670 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 GATA4P43694 442 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MAP2K3P46734 347 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CSNK1DP48730 415 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SH3BP2P78314 561 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OTUD4Q01804 1114 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PDK4Q16654 411 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PPP1R3AQ16821 1122 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 C2CD6Q53TS8 623 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 FAM209BQ5JX69 171 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 Q6ZNX1 250 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 BBS12Q6ZW61 710 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 TPRA1Q86W33 373 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SPARTQ8N0X7 666 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MUC15Q8N387 334 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PSD4Q8NDX1 1056 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 PHF10Q8WUB8 498 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 KAT2AQ92830 837 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MS4A14Q96JA4 679 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SIGLEC10Q96LC7 697 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ATP5SQ99766 215 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SLC6A15Q9H2J7 730 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ZNF768Q9H5H4 540 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SAP30LQ9HAJ7 183 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 APMAPQ9HDC9 416 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ABCB9Q9NP78 766 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 ACP6Q9NPH0 428 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CENPMQ9NSP4 180 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 CBLN4Q9NTU7 201 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 USP36Q9P275 1121 aaKnown RBP3.25□□□□□ -1.89
TOP2A-201ENST00000423485 MEMO1Q9Y316 297 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 OR51B4Q9Y5P0 310 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 A3GALT2U3KPV4 340 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 APC2O95996 2303 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 SCN10AQ9Y5Y9 1956 aa3.25□□□□□ -1.89
TOP2A-201ENST00000423485 A0A0D9SEW6 157 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms