RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 TUSC5Q8IXB3 177 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 ZHX1-C8orf76Q96EF9 292 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 WFIKKN1Q96NZ8 548 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 ARMC7Q9H6L4 198 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 ABCA2Q9BZC7 2435 aa19.53■□□□□ 0.72
TRAF4-204ENST00000422344 DSPPQ9NZW4 1301 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 A0A0G2JND7 137 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 YES1P07947 543 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 CCNA2P20248 432 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 DIO1P49895 249 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 POLR2HP52434 150 aaKnown RBP19.52■□□□□ 0.72
TRAF4-204ENST00000422344 PLAURQ03405 335 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 ZSWIM7Q19AV6 140 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 LRIF1Q5T3J3 769 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF836Q6ZNA1 936 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 TMPPEQ6ZT21 453 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 VRK2Q86Y07 508 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 A4GALTQ9NPC4 353 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 ZNF443Q9Y2A4 671 aaPredicted RBP19.52■□□□□ 0.72
TRAF4-204ENST00000422344 PLEKHA6Q9Y2H5 1048 aa19.52■□□□□ 0.72
TRAF4-204ENST00000422344 VPS13CQ709C8 3753 aa19.52■□□□□ 0.71
TRAF4-204ENST00000422344 FAAHO00519 579 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 ADAM11O75078 769 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 FESP07332 822 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 THBS1P07996 1170 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 DNASE1P24855 282 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 CCKARP32238 428 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 EPS8Q12929 822 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 FOXD4Q12950 439 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-204ENST00000422344 ZNF550Q7Z398 422 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 BBS10Q8TAM1 723 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 GSX1Q9H4S2 264 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-204ENST00000422344 RLIMQ9NVW2 624 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 SLC25A37Q9NYZ2 338 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-204ENST00000422344 CORO2BQ9UQ03 480 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 IFT52Q9Y366 437 aa19.51■□□□□ 0.71
TRAF4-204ENST00000422344 MPDZO75970 2070 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 TMED7-TICAM2A0A0A6YYA0 188 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 A0A1W2PP18 115 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 CDHR4A6H8M9 788 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 SMAD9O15198 467 aaKnown RBP19.5■□□□□ 0.71
TRAF4-204ENST00000422344 HRGP04196 525 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 NUDT7P0C024 238 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 PPP3CBP16298 524 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 HOXB9P17482 250 aaPredicted RBP19.5■□□□□ 0.71
TRAF4-204ENST00000422344 TACR3P29371 465 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 SLC1A3P43003 542 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 CLK1P49759 484 aaKnown RBP19.5■□□□□ 0.71
TRAF4-204ENST00000422344 COPZ1P61923 177 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 RASGEF1BQ0VAM2 473 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 HSP90B2PQ58FF3 399 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 PAGE3Q5JUK9 113 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 GCNT6Q5T4J0 391 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 RNF220Q5VTB9 566 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 PRAMEF8Q5VWM4 474 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 PRAMEF7Q5VXH5 474 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 ANKRD34AQ69YU3 496 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 ADGRG3Q86Y34 549 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 MAL2Q969L2 176 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 DDIT4LQ96D03 193 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 ZC3HAV1LQ96H79 300 aaKnown RBP19.5■□□□□ 0.71
TRAF4-204ENST00000422344 SLAMF8Q9P0V8 285 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 TMED7Q9Y3B3 224 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 HDGFL3Q9Y3E1 203 aa19.5■□□□□ 0.71
TRAF4-204ENST00000422344 EVPLLA8MZ36 301 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 ANGPT2O15123 496 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 CYTIPO60759 359 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 BMP2P12643 396 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 ZNF311Q5JNZ3 666 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 NUFIP2Q7Z417 695 aaKnown RBP19.49■□□□□ 0.71
TRAF4-204ENST00000422344 MSRB3Q8IXL7 192 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 CADM2Q8N3J6 435 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 PSD2Q9BQI7 771 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 SPATA9Q9BWV2 254 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 OR11A1Q9GZK7 315 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 BCO1Q9HAY6 547 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 BCL2L10Q9HD36 194 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 SLC52A3Q9NQ40 469 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 C6orf203Q9P0P8 240 aaPredicted RBP19.49■□□□□ 0.71
TRAF4-204ENST00000422344 LEF1Q9UJU2 399 aaPredicted RBP19.49■□□□□ 0.71
TRAF4-204ENST00000422344 OSGIN1Q9UJX0 560 aa19.49■□□□□ 0.71
TRAF4-204ENST00000422344 ZNF208O43345 1280 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 PMS2P2O95744 297 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 GKN3PP0CG01 181 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 TROVE2P10155 538 aaKnown RBP eCLIP19.48■□□□□ 0.71
TRAF4-204ENST00000422344 MAP2K6P52564 334 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 OR2B6P58173 313 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 TFAP2EQ6VUC0 442 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 STAC2Q6ZMT1 411 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 MTDHQ86UE4 582 aaKnown RBP19.48■□□□□ 0.71
TRAF4-204ENST00000422344 DNAJA3Q96EY1 480 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 ARL5BQ96KC2 179 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 ZNF446Q9NWS9 450 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 EMC3Q9P0I2 261 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 VAPAQ9P0L0 249 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 PRDM4Q9UKN5 801 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 GPR52Q9Y2T5 361 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 NDUFAF1Q9Y375 327 aa19.48■□□□□ 0.71
TRAF4-204ENST00000422344 DNPH1O43598 174 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms