RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 MCIDASD6RGH6 385 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 CBX7O95931 251 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 THBS1P07996 1170 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 HK1P19367 917 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 HNRNPA2B1P22626 353 aaKnown RBP12.69□□□□□ -0.38
CTCFL-203ENST00000422109 HTR2BP41595 481 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-203ENST00000422109 CCR6P51684 374 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 STX4Q12846 297 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 FAPQ12884 760 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 ODF4Q2M2E3 257 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 GARNL3Q5VVW2 1013 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 POMZP3Q6PJE2 187 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 SAMD14Q8IZD0 417 aaPredicted RBP12.69□□□□□ -0.38
CTCFL-203ENST00000422109 SNX33Q8WV41 574 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 OR14A2Q96R54 314 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 LMF1Q96S06 567 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 NMNAT3Q96T66 252 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 ERVMER34-1Q9H9K5 563 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 LRIT1Q9P2V4 623 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 SLC35A3Q9Y2D2 325 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 MPDZO75970 2070 aa12.69□□□□□ -0.38
CTCFL-203ENST00000422109 BRINP1O60477 761 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 SELENOFO60613 162 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 SLC19A2O60779 497 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 KCNJ13O60928 360 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 FZD7O75084 574 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 RPP14O95059 124 aaKnown RBP12.68□□□□□ -0.38
CTCFL-203ENST00000422109 TFP02787 698 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 CTHP32929 405 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 TPMTP51580 245 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 CLDN12P56749 244 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 NTRK2Q16620 822 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 ZNF671Q8TAW3 534 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 DEDD2Q8WXF8 326 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 RASD2Q96D21 266 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 ING3Q9NXR8 418 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 OR10H1Q9Y4A9 318 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 SLCO1B1Q9Y6L6 691 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 A8MUA0 341 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 C2orf74A8MZ97 194 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 FCER2P06734 321 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 DRD5P21918 477 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 F8A1P23610 371 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 MAOBP27338 520 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 PITPNBP48739 271 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 MTNR1BP49286 362 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 CLDN20P56880 219 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 DGCR2P98153 550 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 FCN2Q15485 313 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 KIRREL2Q6UWL6 708 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 ANKRD9Q96BM1 317 aaPredicted RBP12.68□□□□□ -0.38
CTCFL-203ENST00000422109 RBM18Q96H35 190 aaKnown RBP12.68□□□□□ -0.38
CTCFL-203ENST00000422109 TSSK2Q96PF2 358 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 MCCC2Q9HCC0 563 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 DUSP22Q9NRW4 184 aa12.68□□□□□ -0.38
CTCFL-203ENST00000422109 A0A0A6YYJ9 748 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 BLOC1S5-TXNDC5H3BN57 136 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 IFNA16P05015 189 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 RAB3BP20337 219 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 MAOAP21397 527 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 EDNRAP25101 427 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 RRAS2P62070 204 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 ERVK-25P63136 954 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 PSG6Q00889 435 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 MGAT2Q10469 447 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 HES5Q5TA89 166 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 PCNPQ8WW12 178 aaKnown RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 SNAPC3Q92966 411 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 ACOXLQ9NUZ1 547 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 ACOD1A6NK06 481 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 MT-ND4P03905 459 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 ATP1B1P05026 303 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 PTHLHP12272 177 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 GIFP27352 417 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 THBS2P35442 1172 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 RPS27P42677 84 aaKnown RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 GPLD1P80108 840 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 GALK2Q01415 458 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 ZSWIM7Q19AV6 140 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 THOC7Q6I9Y2 204 aaKnown RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 LRRC28Q86X40 367 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 GALNT6Q8NCL4 622 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 BAHD1Q8TBE0 780 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 SCARF2Q96GP6 870 aaPredicted RBP12.67□□□□□ -0.38
CTCFL-203ENST00000422109 COQ7Q99807 217 aa12.67□□□□□ -0.38
CTCFL-203ENST00000422109 TRBV2A0A0J9YWF9 115 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 ARHGEF9O43307 516 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 OR2B3O76000 313 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 FAM157BP0CG42 384 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 CTSEP14091 401 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 ATF1P18846 271 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 TNFRSF4P43489 277 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
CTCFL-203ENST00000422109 ATP12AP54707 1039 aa12.66□□□□□ -0.38
CTCFL-203ENST00000422109 HYAL1Q12794 435 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms