RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 TRAF3IP2O43734 574 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-206ENST00000420746 SUPT3HO75486 399 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 FOXH1O75593 365 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 NCR1O76036 304 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 NKX2-2O95096 273 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 ESRRBO95718 433 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 PMS2P2O95744 297 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 HSPA4LO95757 839 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 NUDT14O95848 222 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 FGGP02679 453 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 PPIAL4GP0DN37 164 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 GPC1P35052 558 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 MAGEA8P43361 318 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 UBE2NP61088 152 aaKnown RBP7.68□□□□□ -1.18
TRIM39-206ENST00000420746 MGAT5Q09328 741 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 IFT88Q13099 833 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 GTF2H2Q13888 395 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 RNASEH2BQ5TBB1 312 aaKnown RBP7.68□□□□□ -1.18
TRIM39-206ENST00000420746 TSPO2Q5TGU0 170 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 GTF2H2CQ6P1K8 395 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 TMEM107Q6UX40 140 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 ISCA2Q86U28 154 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 RELL1Q8IUW5 271 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 IGDCC3Q8IVU1 814 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 MMGT1Q8N4V1 131 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 TMEM86BQ8N661 226 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 POMGNT2Q8NAT1 580 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 LINC01006Q8NI28 216 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 GPR119Q8TDV5 335 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 PIK3R3Q92569 461 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 TRIM44Q96DX7 344 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-206ENST00000420746 MRPL37Q9BZE1 423 aaKnown RBP7.68□□□□□ -1.18
TRIM39-206ENST00000420746 ALG9Q9H6U8 611 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 BRF2Q9HAW0 419 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 TMEM45AQ9NWC5 275 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 PURGQ9UJV8 347 aaKnown RBP7.68□□□□□ -1.18
TRIM39-206ENST00000420746 SLC12A4Q9UP95 1085 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 NOTCH3Q9UM47 2321 aa7.68□□□□□ -1.18
TRIM39-206ENST00000420746 IGHV2OR16-5A0A0B4J2B6 119 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GOLGA6L22H0YM25 854 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 DHHO43323 396 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 HOXA3O43365 443 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 PIP5K1CO60331 668 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 BANF1O75531 89 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 PPP1R3DO95685 299 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 IL3P08700 152 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 STMN1P16949 149 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TIA1P31483 386 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GSTM5P46439 218 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TEKQ02763 1124 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 MVKQ03426 396 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 ZNF154Q13106 437 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 SNTB2Q13425 540 aaKnown RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 DAG1Q14118 895 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 ZKSCAN8Q15776 578 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TOMM34Q15785 309 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GGTA1PQ4G0N0 100 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 MSS51Q4VC12 460 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 SYT14P1Q58G82 188 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 FIP1L1Q6UN15 594 aaKnown RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 CBLN3Q6UW01 205 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 CCBE1Q6UXH8 406 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GOLGA7Q7Z5G4 137 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GSPT2Q8IYD1 628 aaKnown RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 CDRT4Q8N9R6 151 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GLB1L3Q8NCI6 653 aaPredicted RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 OR1K1Q8NGR3 316 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GPR151Q8TDV0 419 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TMEM45BQ96B21 275 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 LRRC39Q96DD0 335 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 ELP4Q96EB1 424 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 OCSTAMPQ9BR26 566 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 MRI1Q9BV20 369 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TRIM5Q9C035 493 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 SEC61A2Q9H9S3 476 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 CAB39LQ9H9S4 337 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 SERINC1Q9NRX5 453 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 NMRK1Q9NWW6 199 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 GRID1Q9ULK0 1009 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TNPO3Q9Y5L0 923 aaKnown RBP7.67□□□□□ -1.18
TRIM39-206ENST00000420746 FLVCR1Q9Y5Y0 555 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 DNAH1Q9P2D7 4330 aa7.67□□□□□ -1.18
TRIM39-206ENST00000420746 TENM2Q9NT68 2774 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 CLDN25C9JDP6 229 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 H3BNH8 94 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 KCNK2O95069 426 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 GPANK1O95872 356 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 PLATP00750 562 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 MYZAPP0CAP1 466 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 CBR1P16152 277 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 ZNF12P17014 697 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 TCN1P20061 433 aaPredicted RBP7.66□□□□□ -1.18
TRIM39-206ENST00000420746 NR4A1P22736 598 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 RAD52P43351 418 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 ASMTP46597 345 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 SERPINB4P48594 390 aa7.66□□□□□ -1.18
TRIM39-206ENST00000420746 RNF144AP50876 292 aaPredicted RBP7.66□□□□□ -1.18
TRIM39-206ENST00000420746 NCBP2P52298 156 aaKnown RBP eCLIP7.66□□□□□ -1.18
TRIM39-206ENST00000420746 ALDH18A1P54886 795 aaKnown RBP7.66□□□□□ -1.18
TRIM39-206ENST00000420746 LCN2P80188 198 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms