RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SURF4O15260 269 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 OR2J2O76002 312 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 GABARAPO95166 117 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 STSP08842 583 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 SLC1A3P43003 542 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 RPS18P62269 152 aaKnown RBP19.11■□□□□ 0.65
GPC1-202ENST00000420138 NHLH1Q02575 133 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 CTF1Q16619 201 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 TMEM164Q5U3C3 297 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 PLAG1Q6DJT9 500 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 OR2T33Q8NG76 320 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 OR5W2Q8NH69 310 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 TBC1D15Q8TC07 691 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 TMEM163Q8TC26 289 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 FANK1Q8TC84 345 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 LRR1Q96L50 414 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 Q96MT0 163 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 DEFB126Q9BYW3 111 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 CNOT2Q9NZN8 540 aaKnown RBP19.11■□□□□ 0.65
GPC1-202ENST00000420138 TCFL5Q9UL49 500 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 GPR52Q9Y2T5 361 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 DMXL1Q9Y485 3027 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 TRAV27A0A087WT01 109 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 CH25HO95992 272 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 RAB40ALP0C0E4 278 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 SAGP10523 405 aaPredicted RBP19.11■□□□□ 0.65
GPC1-202ENST00000420138 TCN2P20062 427 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 ENDOUP21128 410 aaKnown RBP19.11■□□□□ 0.65
GPC1-202ENST00000420138 GAS1P54826 345 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 ST3GAL4Q11206 333 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 AQP6Q13520 282 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 ZNF582Q96NG8 517 aaPredicted RBP19.11■□□□□ 0.65
GPC1-202ENST00000420138 SLC19A3Q9BZV2 496 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 MCCC2Q9HCC0 563 aa19.11■□□□□ 0.65
GPC1-202ENST00000420138 HEATR5AQ86XA9 2040 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 LRRN3E7EW58 273 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 GMFGO60234 142 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 PNMTP11086 282 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 PIPP12273 146 aaPredicted RBP19.1■□□□□ 0.65
GPC1-202ENST00000420138 NR4A1P22736 598 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 MLLT10P55197 1068 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 EGR4Q05215 589 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 IRF3Q14653 427 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 SPCS2Q15005 226 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 TBCEQ15813 527 aaPredicted RBP19.1■□□□□ 0.65
GPC1-202ENST00000420138 EXT1Q16394 746 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 NUP54Q7Z3B4 507 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 SLC46A3Q7Z3Q1 461 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 PPP1R32Q7Z5V6 425 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 OR51A7Q8NH64 312 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 M1APQ8TC57 530 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 DUSP19Q8WTR2 217 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 SLC38A2Q96QD8 506 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 TNFRSF13CQ96RJ3 184 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 RASL10BQ96S79 203 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 MMP25Q9NPA2 562 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 SDK2Q58EX2 2172 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 RIF1Q5UIP0 2472 aaKnown RBP19.1■□□□□ 0.65
GPC1-202ENST00000420138 PTPRBP23467 1997 aa19.1■□□□□ 0.65
GPC1-202ENST00000420138 EFCAB10A6NFE3 127 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 RCBTB2O95199 551 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 SLC2A10O95528 541 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 LCKP06239 509 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 CD63P08962 238 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 FBXO45P0C2W1 286 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 TACR3P29371 465 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 P2RX1P51575 399 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 ZNF91Q05481 1191 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 MEDAGQ5VYS4 303 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 SMARCD3Q6STE5 483 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 P2RY8Q86VZ1 359 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 STX19Q8N4C7 294 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 LRRC17Q8N6Y2 441 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 ZNF563Q8TA94 476 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 TTC9Q92623 222 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 TMCO6Q96DC7 493 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 SGTBQ96EQ0 304 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 TMEM43Q9BTV4 400 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 C12orf10Q9HB07 376 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 PLGRKTQ9HBL7 147 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 ELOA3DA6NLF2 546 aaPredicted RBP19.09■□□□□ 0.65
GPC1-202ENST00000420138 TM4SF5O14894 197 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 SLC22A1O15245 554 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 HCN1O60741 890 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 IGF2P01344 180 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 DBTP11182 482 aaKnown RBP19.09■□□□□ 0.65
GPC1-202ENST00000420138 CEACAM1P13688 526 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 PTGDSP41222 190 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 ELOA3BQ3SY89 546 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 AADACL4Q5VUY2 407 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 RPL13AP3Q6NVV1 102 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 NDUFAF7Q7L592 441 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 OAFQ86UD1 273 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 LNX2Q8N448 690 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 ELOA3Q8NG57 546 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 GPR119Q8TDV5 335 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 GALNT9Q9HCQ5 603 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 MED17Q9NVC6 651 aa19.09■□□□□ 0.65
GPC1-202ENST00000420138 FARSAQ9Y285 508 aaKnown RBP19.09■□□□□ 0.65
GPC1-202ENST00000420138 HRH3Q9Y5N1 445 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms