RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 CES4AQ5XG92 561 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 LAMTOR1Q6IAA8 161 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 GLYATQ6IB77 296 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC25A25Q6KCM7 469 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SCYL2Q6P3W7 929 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 AFTPHQ6ULP2 937 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 RTL4Q6ZR62 310 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 FAM92BQ6ZTR7 304 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 FAM183BPQ6ZVS7 135 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 COPS6Q7L5N1 327 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SSX9Q7RTT3 188 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 ADGRD2Q7Z7M1 963 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TRIM69Q86WT6 500 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TMEM17Q86X19 198 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 RNF130Q86XS8 419 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 PTOV1Q86YD1 416 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SKA3Q8IX90 412 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 KLHDC8BQ8IXV7 354 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 CIARTQ8N365 385 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC43A2Q8N370 569 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 STPG2Q8N412 459 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 C12orf45Q8N5I9 185 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 KLHDC9Q8NEP7 349 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR52K1Q8NGK4 314 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 GOT1L1Q8NHS2 421 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 C9orf43Q8TAL5 461 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 ITFG1Q8TB96 612 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 NANPQ8TBE9 248 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TBCKQ8TEA7 893 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SFT2D1Q8WV19 159 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC5A11Q8WWX8 675 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SHC3Q92529 594 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 HGDQ93099 445 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC25A36Q96CQ1 311 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 CCDC126Q96EE4 140 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 NARS2Q96I59 477 aaKnown RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 LURAP1Q96LR2 239 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 NSMCE2Q96MF7 247 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 Q96MT0 163 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 LINC00052Q96N35 136 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TRNT1Q96Q11 434 aaKnown RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 GFI1Q99684 422 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 NPAS2Q99743 824 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SSX3Q99909 188 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 NAT9Q9BTE0 207 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 BBS2Q9BXC9 721 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 GFRA4Q9GZZ7 299 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TMEM117Q9H0C3 514 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 RAB6CQ9H0N0 254 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 ABCG8Q9H221 673 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 FN3KQ9H479 309 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 OSGEPL1Q9H4B0 414 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 POPDC2Q9HBU9 364 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 UBE2TQ9NPD8 197 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 PRMT8Q9NR22 394 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 GKN1Q9NS71 199 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 ZNF275Q9NSD4 429 aaPredicted RBP3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 C19orf12Q9NSK7 152 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 ANKEF1Q9NU02 776 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 MIOSQ9NXC5 875 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 NSMCE4AQ9NXX6 385 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SPHK1Q9NYA1 384 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SEC14L4Q9UDX3 406 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 BTNL2Q9UIR0 455 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 CDH9Q9ULB4 789 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SCML1Q9UN30 329 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 DUSP12Q9UNI6 340 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SSR3Q9UNL2 185 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 RNF6Q9Y252 685 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 PCDHGA5Q9Y5G8 931 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TRPV2Q9Y5S1 764 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 SLC22A7Q9Y694 548 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 UBR1Q8IWV7 1749 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 C5P01031 1676 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 TOPAZ1Q8N9V7 1692 aa3.04□□□□□ -1.92
SDCBPP3-201ENST00000419629 STRCQ7RTU9 1775 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 A0A1B0GU03 582 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 LOC100130705A0A1B0GUX0 176 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 IQCMA0A1B0GVH7 501 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 A0A1W2PQ09 198 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 CIB4A0PJX0 185 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 A6NCN8 305 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 OR6C74A6NCV1 312 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 ASB14A6NK59 587 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 WASHC1A8K0Z3 465 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 PMS2P5A8MQ11 134 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 SMIM1B2RUZ4 78 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 G3V2T6 193 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 DNASE2O00115 360 aaPredicted RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 BCKDKO14874 412 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 UBDO15205 165 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 INPP4BO15327 924 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 AKR7A2O43488 359 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 B4GAT1O43505 415 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 TPST1O60507 370 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 BANF1O75531 89 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 CDC123O75794 336 aaPredicted RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 KRT33AO76009 404 aa3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 FADS2O95864 444 aaKnown RBP3.03□□□□□ -1.92
SDCBPP3-201ENST00000419629 GSRP00390 522 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms