RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 SYPP08247 313 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 ZNF888P0CJ79 500 aaPredicted RBP12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 RHCEP18577 417 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 FEN1P39748 380 aaKnown RBP12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 MPLP40238 635 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 POLR2GP62487 172 aaKnown RBP eCLIP12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 CFHR1Q03591 330 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 TGM3Q08188 693 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 IGSF11Q5DX21 431 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 MANEAQ5SRI9 462 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 ADAMTS14Q8WXS8 1223 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 PPCDCQ96CD2 204 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 TCTN2Q96GX1 697 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 TEX10Q9NXF1 929 aaPredicted RBP12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 TESQ9UGI8 421 aaKnown RBP12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 BTNL2Q9UIR0 455 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 IGHV5-51A0A0C4DH38 117 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 URADA6NGE7 173 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 DUX1O43812 170 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 LANCL1O43813 399 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 HRGP04196 525 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 FCER2P06734 321 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 PNLIPP16233 465 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 ELK1P19419 428 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 AHCYP23526 432 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 CERS1P27544 350 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 CD1CP29017 333 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 PPM1FP49593 454 aaPredicted RBP12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 COX10Q12887 443 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 SLC9A5Q14940 896 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 NR0B2Q15466 257 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 PRSS53Q2L4Q9 553 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 MPEG1Q2M385 716 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 SPDYE7PQ495Y7 208 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 CEACAM20Q6UY09 585 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 OR2T35Q8NGX2 323 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 OR8K3Q8NH51 312 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 CCDC74AQ96AQ1 378 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 CHRNA10Q9GZZ6 450 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 MIEF1Q9NQG6 463 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 SLC35C2Q9NQQ7 365 aa12.3□□□□□ -0.44
SFTPA1-202ENST00000419470 SCN2AQ99250 2005 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 F8W036 122 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 G3V3Q6 166 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 RNASET2O00584 256 aaKnown RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 TBX19O60806 448 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 IFNA14P01570 189 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 NMBP08949 121 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CSF2RBP32927 897 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 GANABQ14697 944 aaKnown RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 DEFB110Q30KQ9 67 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 SLC25A30Q5SVS4 291 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 FAM198BQ6UWH4 519 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 HSD17B13Q7Z5P4 300 aaPredicted RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 LRRC28Q86X40 367 aaPredicted RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 PLXDC1Q8IUK5 500 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 MCATQ8IVS2 390 aaKnown RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 FAM26EQ8N5C1 309 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CSNK1A1LQ8N752 337 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 TCEANCQ8N8B7 351 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 BVESQ8NE79 360 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 VPS37AQ8NEZ2 397 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 YIPF5Q969M3 257 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 ZNF764Q96H86 408 aaPredicted RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 SFXN2Q96NB2 322 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 ARRDC1-AS1Q9H2J1 176 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 SMOC1Q9H4F8 434 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CDCP1Q9H5V8 836 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 ENAMQ9NRM1 1142 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CYSLTR2Q9NS75 346 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 EMC3Q9P0I2 261 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 PCDHGA5Q9Y5G8 931 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 R4GN57 208 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 IRGMA1A4Y4 181 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 DNASE2O00115 360 aaPredicted RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 AIPO00170 330 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 RBMS1P29558 406 aaKnown RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 GABRA4P48169 554 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 XKP51811 444 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 BTN3A2P78410 334 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 MAP4K2Q12851 820 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 GAB1Q13480 694 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 GSG1Q2KHT4 349 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 AMZ1Q400G9 498 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 GUSBP11Q6P575 273 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 ABHD13Q7L211 337 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CARFQ8N187 725 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 EIF4E3Q8N5X7 224 aaKnown RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 EID2Q8N6I1 236 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 NEIL3Q8TAT5 605 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 ZCCHC10Q8TBK6 192 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CXorf58Q96LI9 332 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 CCDC3Q9BQI4 270 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 KCND3Q9UK17 655 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 MGAT4BQ9UQ53 548 aa12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 MRPS2Q9Y399 296 aaKnown RBP12.29□□□□□ -0.44
SFTPA1-202ENST00000419470 HNRNPCL2B2RXH8 293 aa12.28□□□□□ -0.44
SFTPA1-202ENST00000419470 SRPX2O60687 465 aaPredicted RBP12.28□□□□□ -0.44
SFTPA1-202ENST00000419470 NCR1O76036 304 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms