RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 TSEN54Q7Z6J9 526 aaKnown RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 BORCS5Q969J3 196 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 ADIPOR1Q96A54 375 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 ZG16BQ96DA0 208 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 MRGPRX4Q96LA9 322 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 CNN2Q99439 309 aaKnown RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 FUZQ9BT04 418 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 DCUN1D5Q9BTE7 237 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 FUNDC2Q9BWH2 189 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 EGLN3Q9H6Z9 239 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 AMBNQ9NP70 447 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 MAN2C1Q9NTJ4 1040 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 DKKL1Q9UK85 242 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 CD53P19397 219 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 BDH1Q02338 343 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 LSAMPQ13449 338 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 ZNF574Q6ZN55 896 aaPredicted RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 KCTD20Q7Z5Y7 419 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 PRR22Q8IZ63 422 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 OR52N1Q8NH53 320 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 SNX33Q8WV41 574 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 DACH2Q96NX9 599 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 OR51V1Q9H2C8 321 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 MMP25Q9NPA2 562 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 OCIAD1Q9NX40 245 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 THADAQ6YHU6 1953 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 LRP4O75096 1905 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 TMED7-TICAM2A0A0A6YYA0 188 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 NPIPA5E9PKD4 350 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 ARPC3O15145 178 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 TSPAN2O60636 221 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 WBP4O75554 376 aaKnown RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 STK17BO94768 372 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 SNX4O95219 450 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 IDUAP35475 653 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 DEFA1P59665 94 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 DEFA3P59666 94 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 FOXK2Q01167 660 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 SYT14P1Q58G82 188 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 FAM69AQ5T7M9 428 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 DGAT2L6Q6ZPD8 337 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 SHISA6Q6ZSJ9 500 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 MAML2Q8IZL2 1156 aaPredicted RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 IQCF1Q8N6M8 205 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 ZSCAN1Q8NBB4 408 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 OR4N2Q8NGD1 307 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 FAR1Q8WVX9 515 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 SPACA9Q96E40 222 aaPredicted RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 NECAB3Q96P71 396 aaPredicted RBP7.69□□□□□ -1.18
USP54-203ENST00000418501 NUAK2Q9H093 628 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 ZNF700Q9H0M5 742 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 NPIPA1Q9UND3 350 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 TMED7Q9Y3B3 224 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 PCDHGA3Q9Y5H0 932 aa7.69□□□□□ -1.18
USP54-203ENST00000418501 BLOC1S5-TXNDC5H3BN57 136 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 SURF4O15260 269 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 BCAS1O75363 584 aaPredicted RBP7.68□□□□□ -1.18
USP54-203ENST00000418501 HPP00738 406 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 CD14P08571 375 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MYL9P24844 172 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 CRABP1P29762 137 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 OTX2P32243 289 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 GTF2IRD2BQ6EKJ0 949 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 SLCO6A1Q86UG4 719 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 GTF2IRD2Q86UP8 949 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 RPS19BP1Q86WX3 136 aaKnown RBP7.68□□□□□ -1.18
USP54-203ENST00000418501 CPOQ8IVL8 374 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 SCAIQ8N9R8 606 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 GALNT6Q8NCL4 622 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 OR10H4Q8NGA5 316 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 C3orf49Q96BT1 292 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 PALMDQ9NP74 551 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 INIPQ9NRY2 104 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MRPS18AQ9NVS2 196 aaKnown RBP7.68□□□□□ -1.18
USP54-203ENST00000418501 STUB1Q9UNE7 303 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 A3GALT2U3KPV4 340 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 GNB5O14775 395 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 GABARAPO95166 117 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 NADKO95544 446 aaPredicted RBP7.68□□□□□ -1.18
USP54-203ENST00000418501 TCN2P20062 427 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 UGT2B10P36537 528 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MAP2K4P45985 399 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 GPR50Q13585 617 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 QPRTQ15274 297 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 INAQ16352 499 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 CSRP2Q16527 193 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MOGQ16653 247 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 KIRREL2Q6UWL6 708 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MRGPREQ86SM8 312 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MARCH3Q86UD3 253 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 NLGN4XQ8N0W4 816 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 CACTIN-AS1Q8N1I8 211 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 POGLUT1Q8NBL1 392 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 NLGN4YQ8NFZ3 816 aaPredicted RBP7.68□□□□□ -1.18
USP54-203ENST00000418501 OR4C3Q8NH37 302 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 ATOH1Q92858 354 aaPredicted RBP7.68□□□□□ -1.18
USP54-203ENST00000418501 ZBTB8AQ96BR9 441 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 KCTD7Q96MP8 289 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MMP27Q9H306 513 aa7.68□□□□□ -1.18
USP54-203ENST00000418501 MYOTQ9UBF9 498 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms