RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 OR11A1Q9GZK7 315 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 LIME1Q9H400 295 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 TIGARQ9NQ88 270 aa18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 LEF1Q9UJU2 399 aaPredicted RBP18.35■□□□□ 0.53
PKNOX1-202ENST00000418336 GCM2O75603 506 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 POU2F1P14859 743 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 LOXP28300 417 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 TACR3P29371 465 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 TFAP2EQ6VUC0 442 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 STAC2Q6ZMT1 411 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 CDH24Q86UP0 819 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 CDC20BQ86Y33 519 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 PTOV1Q86YD1 416 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 NFKBIDQ8NI38 313 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 BBS10Q8TAM1 723 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 CLEC4MQ9H2X3 399 aaPredicted RBP18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 RAD21L1Q9H4I0 556 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 TMEM38AQ9H6F2 299 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 PRR14LQ5THK1 2151 aa18.34■□□□□ 0.53
PKNOX1-202ENST00000418336 TMED7-TICAM2A0A0A6YYA0 188 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 ZC3H12DA2A288 527 aaKnown RBP18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF208O43345 1280 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 RAMP1O60894 148 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 PRKD3O94806 890 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 PMS2P2O95744 297 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 THBDP07204 575 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 FESP07332 822 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 IMPDH2P12268 514 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 SLC7A1P30825 629 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 NTF4P34130 210 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 POLR2HP52434 150 aaKnown RBP18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 H3F3AP84243 136 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 GCNT6Q5T4J0 391 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 SERPINA11Q86U17 422 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF440Q8IYI8 595 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 GABRG1Q8N1C3 465 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 ANKRD27Q96NW4 1050 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF317Q96PQ6 595 aaPredicted RBP18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF300Q96RE9 604 aaPredicted RBP18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 POLDIP3Q9BY77 421 aaKnown RBP18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 PLEKHF2Q9H8W4 249 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 SERINC1Q9NRX5 453 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 PRDM4Q9UKN5 801 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 TRIM33Q9UPN9 1127 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 TMED7Q9Y3B3 224 aa18.33■□□□□ 0.52
PKNOX1-202ENST00000418336 IGKV3D-15A0A087WSY6 115 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 UQCRHLA0A096LP55 91 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF716A6NP11 495 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 DEFB108AA8MXU0 73 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 GOSR1O95249 250 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 PLGP00747 810 aaPredicted RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 YES1P07947 543 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 ETS2P15036 469 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 PPIBP23284 216 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 DNAJA1P31689 397 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 HTR3AP46098 478 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 CLK1P49759 484 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 GZMMP51124 257 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 CTBP2P56545 445 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 PCBP3P57721 371 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 CDK6Q00534 326 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 GNA13Q14344 377 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 GTF2IRD2BQ6EKJ0 949 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 NET1Q7Z628 596 aaPredicted RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 DHDDSQ86SQ9 333 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 MTDHQ86UE4 582 aaKnown RBP18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 GTF2IRD2Q86UP8 949 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 SLC43A2Q8N370 569 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 SLC35B4Q969S0 331 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 C3orf49Q96BT1 292 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 CGREF1Q99674 301 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 WFDC6Q9BQY6 131 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 C12orf49Q9H741 205 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 MED4Q9NPJ6 270 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 SAR1AQ9NR31 198 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 IFT52Q9Y366 437 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 NDUFAF1Q9Y375 327 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 HDGFL3Q9Y3E1 203 aa18.32■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF724A8MTY0 619 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 TMEM229AB2RXF0 380 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 C16orf97H3BN30 126 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 FXYD1O00168 92 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 SULT2B1O00204 365 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 FRS3O43559 492 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 TPST1O60507 370 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 NPIPB7O75200 414 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 PDK3Q15120 406 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 GLIPR1L2Q4G1C9 344 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF311Q5JNZ3 666 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 DHRS4L2Q6PKH6 230 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 ZNF550Q7Z398 422 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 DNAJA3Q96EY1 480 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 SLC39A3Q9BRY0 314 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 KLHL28Q9NXS3 571 aa18.31■□□□□ 0.52
PKNOX1-202ENST00000418336 ATP8B1O43520 1251 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 DNPH1O43598 174 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 CCNA2P20248 432 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 CRYGSP22914 178 aa18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 FKBP2P26885 142 aaKnown RBP18.3■□□□□ 0.52
PKNOX1-202ENST00000418336 HTR2AP28223 471 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms