RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 FAAHO00519 579 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 AP3D1O14617 1153 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 SMAD9O15198 467 aaKnown RBP13.63□□□□□ -0.23
NUP50-204ENST00000417702 CYTIPO60759 359 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 HNRNPCL1O60812 293 aaKnown RBP13.63□□□□□ -0.23
NUP50-204ENST00000417702 ADAM11O75078 769 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 FESP07332 822 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 HNRNPCL4P0DMR1 293 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 CCNA2P20248 432 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 PSMB1P20618 241 aaKnown RBP13.63□□□□□ -0.23
NUP50-204ENST00000417702 PPIBP23284 216 aaKnown RBP13.63□□□□□ -0.23
NUP50-204ENST00000417702 SLC1A3P43003 542 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 GUCY1A3Q02108 690 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 EPS8Q12929 822 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 AGKQ53H12 422 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 TFAP2EQ6VUC0 442 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
NUP50-204ENST00000417702 VRK2Q86Y07 508 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 ADGRG3Q86Y34 549 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 FUNDC1Q8IVP5 155 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 STEAP2Q8NFT2 490 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 DDIT4LQ96D03 193 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 PSD2Q9BQI7 771 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 HDHD5Q9BXW7 423 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 ACTR6Q9GZN1 396 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 OR10A4Q9H209 315 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 OSGIN1Q9UJX0 560 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 PRDM4Q9UKN5 801 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 ZNF443Q9Y2A4 671 aaPredicted RBP13.63□□□□□ -0.23
NUP50-204ENST00000417702 IFT52Q9Y366 437 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 TMED7Q9Y3B3 224 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 DSPPQ9NZW4 1301 aa13.63□□□□□ -0.23
NUP50-204ENST00000417702 FREM1Q5H8C1 2179 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 MED13LQ71F56 2210 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 CDHR4A6H8M9 788 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 DEFB108AA8MXU0 73 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 C5orf58C9J3I9 102 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 ZNF208O43345 1280 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 DNPH1O43598 174 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 PMS2P2O95744 297 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 THBS1P07996 1170 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 VIMP08670 466 aaKnown RBP13.62□□□□□ -0.23
NUP50-204ENST00000417702 NCF2P19878 526 aaPredicted RBP13.62□□□□□ -0.23
NUP50-204ENST00000417702 TACR3P29371 465 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 MDH1P40925 334 aaKnown RBP13.62□□□□□ -0.23
NUP50-204ENST00000417702 MAP2K6P52564 334 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 COPZ1P61923 177 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 RPS26P11Q5JNZ5 115 aaPredicted RBP13.62□□□□□ -0.23
NUP50-204ENST00000417702 LRIF1Q5T3J3 769 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 PRAMEF8Q5VWM4 474 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 PRAMEF7Q5VXH5 474 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 ZNF836Q6ZNA1 936 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 GALNT5Q7Z7M9 940 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 CXorf67Q86X51 503 aaPredicted RBP13.62□□□□□ -0.23
NUP50-204ENST00000417702 STON2Q8WXE9 905 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 MBD6Q96DN6 1003 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 THOC1Q96FV9 657 aaKnown RBP13.62□□□□□ -0.23
NUP50-204ENST00000417702 ARL5BQ96KC2 179 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 CCDC134Q9H6E4 229 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 NPHS2Q9NP85 383 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 A4GALTQ9NPC4 353 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 EMC3Q9P0I2 261 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 TRIM33Q9UPN9 1127 aa13.62□□□□□ -0.23
NUP50-204ENST00000417702 A0A1W2PPR1 153 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 SIAH2O43255 324 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 ATE1O95260 518 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 NUDT7P0C024 238 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 TROVE2P10155 538 aaKnown RBP eCLIP13.61□□□□□ -0.23
NUP50-204ENST00000417702 BMP2P12643 396 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 KLK2P20151 261 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 IL32P24001 234 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 OR2B6P58173 313 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 P2RY6Q15077 328 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 PDK3Q15120 406 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 BEX5Q5H9J7 111 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 GCNT6Q5T4J0 391 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 RNF220Q5VTB9 566 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 ZNF100Q8IYN0 542 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 GABRG1Q8N1C3 465 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 CADM2Q8N3J6 435 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 BBS10Q8TAM1 723 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 PIGXQ8TBF5 258 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 MAL2Q969L2 176 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 ZNF775Q96BV0 537 aaPredicted RBP13.61□□□□□ -0.23
NUP50-204ENST00000417702 ALPK1Q96QP1 1244 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 ZNF300Q96RE9 604 aaPredicted RBP13.61□□□□□ -0.23
NUP50-204ENST00000417702 SPATA9Q9BWV2 254 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 CXXC4Q9H2H0 198 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 BCL2L10Q9HD36 194 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 SLC25A37Q9NYZ2 338 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 TMEM181Q9P2C4 612 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 DCTN4Q9UJW0 460 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 ING1Q9UK53 422 aaPredicted RBP13.61□□□□□ -0.23
NUP50-204ENST00000417702 CORO2BQ9UQ03 480 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 TRAPPC4Q9Y296 219 aa13.61□□□□□ -0.23
NUP50-204ENST00000417702 PRR14LQ5THK1 2151 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms