RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 MRPL15Q9P015 296 aaKnown RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 RWDD3Q9Y3V2 267 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 A0A087WV48 116 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 SERPINI2O75830 405 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 IGKV1D-16P01601 117 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 PEPDP12955 493 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 PSMB10P40306 273 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 SRP54P61011 504 aaKnown RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 POU6F2P78424 691 aaPredicted RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 DEFB110Q30KQ9 67 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ALG10BQ5I7T1 473 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 DMKNQ6E0U4 476 aaPredicted RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 NUDT18Q6ZVK8 323 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 GPALPP1Q8IXQ4 340 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 FAM98AQ8NCA5 519 aaKnown RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 CAMKVQ8NCB2 501 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 THAP4Q8WY91 577 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 HERVK_113Q902F9 699 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 RERGQ96A58 199 aaPredicted RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 OR14A2Q96R54 314 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 ZFYVE21Q9BQ24 234 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 GTPBP2Q9BX10 602 aaKnown RBP13.35□□□□□ -0.27
HDAC9-208ENST00000417496 MED28Q9H204 178 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 OBP2AQ9NY56 170 aa13.35□□□□□ -0.27
HDAC9-208ENST00000417496 DOCK8Q8NF50 2099 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 A0A0B4J2E0 115 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 A0A1B0GX12 115 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 FAM171A2A8MVW0 826 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 IDSB3KWA1 339 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 LINC01565O15544 149 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 TRIM3O75382 744 aaPredicted RBP13.34□□□□□ -0.27
HDAC9-208ENST00000417496 ADRB1P08588 477 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 VSX2P58304 361 aaPredicted RBP13.34□□□□□ -0.27
HDAC9-208ENST00000417496 KIR2DS3Q14952 304 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 ANKRD54Q6NXT1 300 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 PELI1Q96FA3 418 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 TEKT2Q9UIF3 430 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 ST6GALNAC2Q9UJ37 374 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 DTX4Q9Y2E6 619 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 CACNA1IQ9P0X4 2223 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 URADA6NGE7 173 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 C4orf47A7E2U8 309 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 RDH16O75452 317 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 MT-ND4P03905 459 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 HK1P19367 917 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 GRPRP30550 384 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 NTSR1P30989 418 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 PSG6Q00889 435 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 CAMK2BQ13554 666 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 RTL4Q6ZR62 310 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 C9orf62Q8N4C0 152 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 TOMM5Q8N4H5 51 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 OR11H4Q8NGC9 324 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 ZPLD1Q8TCW7 415 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 YIPF5Q969M3 257 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 DERL3Q96Q80 235 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 ZNF346Q9UL40 294 aaKnown RBP13.34□□□□□ -0.27
HDAC9-208ENST00000417496 SATB2Q9UPW6 733 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 IER3IP1Q9Y5U9 82 aa13.34□□□□□ -0.27
HDAC9-208ENST00000417496 MCIDASD6RGH6 385 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 TNFSF14O43557 240 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 CBX7O95931 251 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 TCRBP04435 133 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 HOXB2P14652 356 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 DRD5P21918 477 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 ACAA2P42765 397 aaKnown RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 NRG3P56975 720 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 CEP78Q5JTW2 689 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 BICRALQ6AI39 1079 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 TPRA1Q86W33 373 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF655Q8N720 491 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 PHOSPHO2Q8TCD6 241 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 DACT3Q96B18 629 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 ANKRD9Q96BM1 317 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 KCTD12Q96CX2 325 aaKnown RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 GPR174Q9BXC1 333 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 TCEAL2Q9H3H9 227 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 GHITMQ9H3K2 345 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 FOLH1BQ9HBA9 442 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 SLCO1C1Q9NYB5 712 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 GNG8Q9UK08 70 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 TEX13CA0A0J9YWL9 993 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 A6NCN8 305 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 EPXP11678 715 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 MAP3K8P41279 467 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 GDI2P50395 445 aaKnown RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 ERV3-1Q14264 604 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 NFATC4Q14934 902 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 ZNF784Q8NCA9 323 aaPredicted RBP13.33□□□□□ -0.28
HDAC9-208ENST00000417496 OR9A4Q8NGU2 314 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 SIPA1Q96FS4 1042 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 WDR92Q96MX6 357 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 NMNAT3Q96T66 252 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 AUNIPQ9H7T9 357 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 INPP5EQ9NRR6 644 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 HRASLS2Q9NWW9 162 aa13.33□□□□□ -0.28
HDAC9-208ENST00000417496 NKIRAS2Q9NYR9 191 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms