RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 C18orf12Q96KH6 178 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 COX4I2Q96KJ9 171 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
UBXN4-203ENST00000416538 MANSC1Q9H8J5 431 aa13.37□□□□□ -0.27
UBXN4-203ENST00000416538 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
UBXN4-203ENST00000416538 NIPBLQ6KC79 2804 aaeCLIP13.37□□□□□ -0.27
UBXN4-203ENST00000416538 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 TMEM72A0PK05 275 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 TRIM64A6NGJ6 449 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 TRIM64BA6NI03 449 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 TRPC5OSA6NMA1 111 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 SULT2B1O00204 365 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 ETFAP13804 333 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 HOXB9P17482 250 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-203ENST00000416538 CCNA2P20248 432 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 FPR1P21462 350 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 IGHV1-2P23083 117 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 PTH2RP49190 550 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 HPCAP84074 193 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 RPS26P11Q5JNZ5 115 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-203ENST00000416538 NXNQ6DKJ4 435 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 LRRC74BQ6ZQY2 392 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF621Q6ZSS3 439 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 Q6ZT83 130 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 ARFGAP2Q8N6H7 521 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 STEAP2Q8NFT2 490 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF563Q8TA94 476 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 SLC25A43Q8WUT9 341 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-203ENST00000416538 WDR60Q8WVS4 1066 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 KISS1RQ969F8 398 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-203ENST00000416538 Q96MF0 132 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-203ENST00000416538 NPAP1Q9NZP6 1156 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 OSGIN1Q9UJX0 560 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 CHST2Q9Y4C5 530 aa13.36□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF724A8MTY0 619 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 RFXANKO14593 260 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 HS3ST1O14792 307 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 IGHV3-9P01782 118 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 INHBBP09529 407 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 TFPIP10646 304 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 IMPDH2P12268 514 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 IDO1P14902 403 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 IL32P24001 234 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 IDH2P48735 452 aaKnown RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 NR1H2P55055 460 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 FOXG1P55316 489 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 ITGADQ13349 1161 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 NCMAPQ5T1S8 102 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF836Q6ZNA1 936 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 BHLHA15Q7RTS1 189 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 YTHDF3Q7Z739 585 aaKnown RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 VRK2Q86Y07 508 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 P3H2Q8IVL5 708 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 CCDC103Q8IW40 242 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 GLB1L3Q8NCI6 653 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 KBTBD8Q8NFY9 601 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 AKAP1Q92667 903 aaKnown RBP eCLIP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 TACO1Q9BSH4 297 aaKnown RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 RSPO3Q9BXY4 272 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-203ENST00000416538 POTEKPQ9BYX7 375 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 GSX2Q9BZM3 304 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 RLIMQ9NVW2 624 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 LIPT1Q9Y234 373 aa13.35□□□□□ -0.27
UBXN4-203ENST00000416538 ALPK2Q86TB3 2170 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 TMED7-TICAM2A0A0A6YYA0 188 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 H7C1Q1 480 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 KLF11O14901 512 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 SLC22A3O75751 556 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 PMS2P2O95744 297 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 BCHEP06276 602 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 GKN3PP0CG01 181 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 TACR3P29371 465 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 EPS8Q12929 822 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 P2RY6Q15077 328 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 ATG16L1Q676U5 607 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 BIVMQ86UB2 503 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 MTDHQ86UE4 582 aaKnown RBP13.34□□□□□ -0.27
UBXN4-203ENST00000416538 C10orf111Q8N326 155 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 TRIML2Q8N7C3 387 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 ZNF611Q8N823 705 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 PIWIL2Q8TC59 973 aaKnown RBP13.34□□□□□ -0.27
UBXN4-203ENST00000416538 ZBTB18Q99592 522 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 SLCO1B3Q9NPD5 702 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 FANCFQ9NPI8 374 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 SERINC1Q9NRX5 453 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 NKIRAS1Q9NYS0 192 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 RNF115Q9Y4L5 304 aa13.34□□□□□ -0.27
UBXN4-203ENST00000416538 DPRXA6NFQ7 191 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 SLCO1B7G3V0H7 640 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 IL6P05231 212 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 SOD3P08294 240 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 NR2F1P10589 423 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 PRG2P13727 222 aa13.33□□□□□ -0.28
UBXN4-203ENST00000416538 ADSLP30566 484 aaPredicted RBP13.33□□□□□ -0.28
UBXN4-203ENST00000416538 ACAA2P42765 397 aaKnown RBP13.33□□□□□ -0.28
UBXN4-203ENST00000416538 SLC16A1P53985 500 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms