RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 CLK1P49759 484 aaKnown RBP13.48□□□□□ -0.25
DDX56-202ENST00000415758 PDLIM4P50479 330 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 FOXG1P55316 489 aaPredicted RBP13.48□□□□□ -0.25
DDX56-202ENST00000415758 PHC1P78364 1004 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 H3F3AP84243 136 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 SRSF2Q01130 221 aaKnown RBP13.48□□□□□ -0.25
DDX56-202ENST00000415758 SQLEQ14534 574 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 SPDYE7PQ495Y7 208 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 BHLHB9Q6PI77 547 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 OR5D16Q8NGK9 328 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 OIT3Q8WWZ8 545 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 BOD1Q96IK1 185 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 ARL5BQ96KC2 179 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 GATA5Q9BWX5 397 aaPredicted RBP13.48□□□□□ -0.25
DDX56-202ENST00000415758 C1QTNF6Q9BXI9 259 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 SLC17A5Q9NRA2 495 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 CHRNA9Q9UGM1 479 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 TRAPPC4Q9Y296 219 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 AMDHD2Q9Y303 409 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 FIS1Q9Y3D6 152 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 SPIN1Q9Y657 262 aaPredicted RBP13.48□□□□□ -0.25
DDX56-202ENST00000415758 ATP23Q9Y6H3 246 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 LOC390937A0A1W2PQ73 354 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 ANKRD28O15084 1053 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 PGRP06401 933 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 UBTFL6P0CB48 400 aaPredicted RBP13.47□□□□□ -0.25
DDX56-202ENST00000415758 HNF1AP20823 631 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 PGM1P36871 562 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 GPR68Q15743 365 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 ARHGAP11BQ3KRB8 267 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 LIPNQ5VXI9 398 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 EIF3MQ7L2H7 374 aaKnown RBP13.47□□□□□ -0.25
DDX56-202ENST00000415758 C10orf107Q8IVU9 208 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 RIMKLAQ8IXN7 391 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 DDIASQ8IXT1 998 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 FAM71CQ8NEG0 241 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 MNS1Q8NEH6 495 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 TWIST2Q8WVJ9 160 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 PPP3R2Q96LZ3 170 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 PRPF18Q99633 342 aaKnown RBP13.47□□□□□ -0.25
DDX56-202ENST00000415758 PIMREGQ9BSJ6 248 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 ZNF350Q9GZX5 532 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 C12orf65Q9H3J6 166 aaKnown RBP13.47□□□□□ -0.25
DDX56-202ENST00000415758 MYOZ1Q9NP98 299 aaPredicted RBP13.47□□□□□ -0.25
DDX56-202ENST00000415758 PARPBPQ9NWS1 579 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 TRAF6Q9Y4K3 522 aa13.47□□□□□ -0.25
DDX56-202ENST00000415758 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.47□□□□□ -0.25
DDX56-202ENST00000415758 CENPVL1A0A0U1RR11 272 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 PIP5K1BO14986 540 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 TRIM13O60858 407 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 CYP7B1O75881 506 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 TFPIP10646 304 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 MAGEA8P43361 318 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 HBA1P69905 142 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 SLC25A3Q00325 362 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 TGFBR3Q03167 851 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 GGTLC2Q14390 218 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 PTGR1Q14914 329 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 XKR7Q5GH72 579 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 IL17RELQ6ZVW7 336 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 GRINAQ7Z429 371 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 ADGRG3Q86Y34 549 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 CCDC103Q8IW40 242 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 CCDC63Q8NA47 563 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 OR52E4Q8NGH9 312 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 FOXN4Q96NZ1 517 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 BHLHE41Q9C0J9 482 aaPredicted RBP13.46□□□□□ -0.25
DDX56-202ENST00000415758 SERHL2Q9H4I8 314 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 CHODLQ9H9P2 273 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 CTPS2Q9NRF8 586 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 MID2Q9UJV3 735 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 MKLN1Q9UL63 735 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 FKBP7Q9Y680 259 aa13.46□□□□□ -0.25
DDX56-202ENST00000415758 IGHV4-61A0A0C4DH41 118 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 APEHP13798 732 aaKnown RBP13.45□□□□□ -0.26
DDX56-202ENST00000415758 PRPS1L1P21108 318 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 MATN1P21941 496 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 PRPS1P60891 318 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 PCLAFQ15004 111 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 MAPK14Q16539 360 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 C6orf120Q7Z4R8 191 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 IFT20Q8IY31 132 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 ZNF540Q8NDQ6 660 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 OR5AK3PQ8NH89 298 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 SORCS2Q96PQ0 1159 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 DUSP26Q9BV47 211 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 EML4Q9HC35 981 aaKnown RBP13.45□□□□□ -0.26
DDX56-202ENST00000415758 SLC7A10Q9NS82 523 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 TMEM181Q9P2C4 612 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 GIMAP2Q9UG22 337 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 SLC35A3Q9Y2D2 325 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 SLC9A8Q9Y2E8 581 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 FLVCR1Q9Y5Y0 555 aa13.45□□□□□ -0.26
DDX56-202ENST00000415758 TMEM233B4DJY2 109 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 ATP6V1G2-DDX39BF2Z307 99 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 COPEO14579 308 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 CFLARO15519 480 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 EIF1BO60739 113 aaKnown RBP13.44□□□□□ -0.26
DDX56-202ENST00000415758 PEX11AO75192 247 aa13.44□□□□□ -0.26
DDX56-202ENST00000415758 TGFAP01135 160 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms