RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 HOXB5P09067 269 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 LINC00032P0C843 101 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 HOXB2P14652 356 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 HOXA5P20719 270 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 GIFP27352 417 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 HTR2AP28223 471 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 IDH2P48735 452 aaKnown RBP18.91■□□□□ 0.62
AP1S3-205ENST00000415298 SH3BP2P78314 561 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 FZD5Q13467 585 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 KCNMB1Q16558 191 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 ZNF805Q5CZA5 627 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 LPCAT3Q6P1A2 487 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 HIST3H2AQ7L7L0 130 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 SPICQ8N5J4 248 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 OR56A4Q8NGH8 313 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 OR52N2Q8NGI0 321 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 HIST1H2ACQ93077 130 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 NDUFAF3Q9BU61 184 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 TUBB1Q9H4B7 451 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 GAR1Q9NY12 217 aaKnown RBP18.91■□□□□ 0.62
AP1S3-205ENST00000415298 OR10H1Q9Y4A9 318 aa18.91■□□□□ 0.62
AP1S3-205ENST00000415298 PRR23D1E9PI22 279 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 SLC19A2O60779 497 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 SERPINA5P05154 406 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 SNRPCP09234 159 aaKnown RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 PRR23D2P0DMB1 279 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 NME1P15531 152 aaKnown RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 CXADRP78310 365 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 MELKQ14680 651 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 GFOD2Q3B7J2 385 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 RIPPLY2Q5TAB7 128 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 C11orf88Q6PI97 169 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 QSOX2Q6ZRP7 698 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 PARS2Q7L3T8 475 aaKnown RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 ISCA2Q86U28 154 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 BMPERQ8N8U9 685 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 GABRG3Q99928 467 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 THUMPD3Q9BV44 507 aaKnown RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 SEC11CQ9BY50 192 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 LMAN1LQ9HAT1 526 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 RPS6KB2Q9UBS0 482 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 MOKQ9UQ07 419 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 NCF1BA6NI72 391 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 NCF1CA8MVU1 366 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 ZNF593O00488 134 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 MAN2B1O00754 1011 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 CLDN7O95471 211 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 BPIP17213 487 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 CDX1P47902 265 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 PRKXP51817 358 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 GAS6Q14393 721 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 ZNF678Q5SXM1 525 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 GLT6D1Q7Z4J2 308 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 TGM7Q96PF1 710 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 ACPTQ9BZG2 426 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 NPDC1Q9NQX5 325 aaPredicted RBP18.9■□□□□ 0.62
AP1S3-205ENST00000415298 MGAT4CQ9UBM8 478 aa18.9■□□□□ 0.62
AP1S3-205ENST00000415298 NUMA1Q14980 2115 aa18.89■□□□□ 0.62
AP1S3-205ENST00000415298 OR2T1O43869 369 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 CSO75390 466 aaKnown RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 PRNPP04156 253 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 MAPK3P27361 379 aaPredicted RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 CDC73Q6P1J9 531 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 ZNF614Q8N883 585 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 OR2G2Q8NGZ5 317 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 ATF6BQ99941 703 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 PTGES2Q9H7Z7 377 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 ISYNA1Q9NPH2 558 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 ENAMQ9NRM1 1142 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 FNDC3AQ9Y2H6 1198 aaKnown RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 NEUROG3Q9Y4Z2 214 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 FAM95CA0A1B0GW59 222 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 MID1O15344 667 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 EFSO43281 561 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 PRR35P0CG20 571 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 UBBP0CG47 229 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 UBCP0CG48 685 aaKnown RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 ZNF35P13682 527 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 RPS27AP62979 156 aaKnown RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 UBA52P62987 128 aaKnown RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 MRPS21P82921 87 aaKnown RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 PRR5P85299 388 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 MLLT11Q13015 90 aaPredicted RBP18.89■□□□□ 0.61
AP1S3-205ENST00000415298 CDKN3Q16667 212 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 C1orf185Q5T7R7 199 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 XAGE5Q8WWM1 108 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 TSPAN17Q96FV3 270 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 MRGPRX4Q96LA9 322 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 GAL3ST4Q96RP7 486 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 EPHX3Q9H6B9 360 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 SERGEFQ9UGK8 458 aa18.89■□□□□ 0.61
AP1S3-205ENST00000415298 SYNDIG1LA6NDD5 238 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 GFYI3L273 518 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 GUSBP08236 651 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 PRPS2P11908 318 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 AKR1C2P52895 323 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 AKR1C1Q04828 323 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 CSHL1Q14406 222 aa18.88■□□□□ 0.61
AP1S3-205ENST00000415298 HDDC3Q8N4P3 179 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms