RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 B3GALT5Q9Y2C3 310 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 AP3M1Q9Y2T2 418 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 WBP11Q9Y2W2 641 aaKnown RBP3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 NDUFAF1Q9Y375 327 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 CMAHPQ9Y471 501 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 TAF1LQ8IZX4 1826 aa3.28□□□□□ -1.88
HMGB3P23-201ENST00000414981 STRCQ7RTU9 1775 aa3.28□□□□□ -1.89
HMGB3P23-201ENST00000414981 LTBP1Q14766 1721 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MYH9P35579 1960 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 C1orf232A0A0U1RR37 186 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GOLGA8IPA6NC78 632 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GOLGA8JA6NMD2 632 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 YDJCA8MPS7 323 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 EVPLLA8MZ36 301 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 K7ERI5 159 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 AIM2O14862 343 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACOX3O15254 700 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GPR137BO60478 399 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 UGT2B11O75310 529 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 STBD1O95210 358 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 VAPBO95292 243 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PGLSO95336 258 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCNE2O96020 404 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RLN1P04808 185 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PGK2P07205 417 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 APRTP07741 180 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 HMBSP08397 361 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SBK2P0C263 348 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF883P0CG24 379 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GSTT2P0CG29 244 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GSTT2BP0CG30 244 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CALCBP10092 127 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 VPREB1P12018 145 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 LIFP15018 202 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 LBPP18428 481 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 M6PRP20645 277 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCND3P30281 292 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PKLRP30613 574 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RORAP35398 523 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CBX5P45973 191 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RPS5P46782 204 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 EIF2B2P49770 351 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 HSPA2P54652 639 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CDH6P55285 790 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RPL10AP62906 217 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MS4A2Q01362 244 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GALK2Q01415 458 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RBPJQ06330 500 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ACSM1Q08AH1 577 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 BST2Q10589 180 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ENPP2Q13822 863 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 IL18Q14116 193 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 NR1D2Q14995 579 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CYTH1Q15438 398 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 DLG2Q15700 870 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ATP6AP1Q15904 470 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 HNRNPA1L2Q32P51 320 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RFX4Q33E94 735 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 HSDL1Q3SXM5 330 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PTPN20Q4JDL3 420 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 LCE1FQ5T754 118 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZC2HC1BQ5TFG8 222 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TTC23Q5W5X9 447 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CLEC6AQ6EIG7 209 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TXNRD3NBQ6F5E7 133 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PTRHD1Q6GMV3 140 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TWF2Q6IBS0 349 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SCYL2Q6P3W7 929 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CYP4V2Q6ZWL3 525 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 STRADAQ7RTN6 431 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PRSS48Q7RTY5 328 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 NANOGNBQ7Z5D8 188 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 LINC00523Q86TU6 105 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ADIPOR2Q86V24 386 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MMAAQ8IVH4 418 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CCDC60Q8IWA6 550 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TIGD4Q8IY51 512 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 LGI2Q8N0V4 545 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PARP8Q8N3A8 854 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ZNF248Q8NDW4 579 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ANGPTL6Q8NI99 470 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 GRPEL2Q8TAA5 225 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CD300LFQ8TDQ1 290 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PAQR8Q8TEZ7 354 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 PHF10Q8WUB8 498 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 MITD1Q8WV92 249 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 HEXDCQ8WVB3 486 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 LPGAT1Q92604 370 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TAF15Q92804 592 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TNFRSF14Q92956 283 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ESAMQ96AP7 390 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TAMM41Q96BW9 452 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 RCN3Q96D15 328 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 TMA16Q96EY4 203 aaKnown RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CERS2Q96G23 380 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SENP5Q96HI0 755 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 SH3YL1Q96HL8 342 aaPredicted RBP3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 ELMO2Q96JJ3 720 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 CEP170P1Q96L14 293 aa3.27□□□□□ -1.89
HMGB3P23-201ENST00000414981 NSMCE3Q96MG7 304 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms