RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 TMEM102Q8N9M5 508 aaPredicted RBP11.11□□□□□ -0.63
PTPRF-205ENST00000414879 HMGCLL1Q8TB92 370 aa11.11□□□□□ -0.63
PTPRF-205ENST00000414879 C16orf58Q96GQ5 468 aa11.11□□□□□ -0.63
PTPRF-205ENST00000414879 ULBP2Q9BZM5 246 aa11.11□□□□□ -0.63
PTPRF-205ENST00000414879 UCKL1Q9NWZ5 548 aa11.11□□□□□ -0.63
PTPRF-205ENST00000414879 TMED7-TICAM2A0A0A6YYA0 188 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 LGI1O95970 557 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 GTF2F2P13984 249 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 TNFSF4P23510 183 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 PITPNBP48739 271 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ZNF628Q5EBL2 1059 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 RPS19BP1Q86WX3 136 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ANKRD13BQ86YJ7 626 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ZMYND19Q96E35 227 aaPredicted RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SYT3Q9BQG1 590 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 TMEM9BQ9NQ34 198 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 TMED7Q9Y3B3 224 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 NPIPA5A0A0B4J1W7 369 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 A0A1B0GWA3 101 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 NPIPA7E9PJI5 369 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 MRPL33O75394 65 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 PTTG1O95997 202 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 CSF2P04141 144 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 LCATP04180 440 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 NUDT7P0C024 238 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 NPIPA8P0DM63 369 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SDHBP21912 280 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 HOXD12P35452 270 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 BSGP35613 385 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 CYB561P49447 251 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 P2RX1P51575 399 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SUMO3P55854 103 aaPredicted RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SPIN3Q5JUX0 258 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 KIAA0907Q7Z7F0 614 aaPredicted RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 LSM14AQ8ND56 463 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 LHPPQ9H008 270 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 KLHL13Q9P2N7 655 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ZNF69Q9UC07 566 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 EMC9Q9Y3B6 208 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 TOX3O15405 576 aaPredicted RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 CD14P08571 375 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 DPP4P27487 766 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SNRPGP62308 76 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 FGL1Q08830 312 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SNTB2Q13425 540 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 RIN1Q13671 783 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 EMC4Q5J8M3 183 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 TMEM31Q5JXX7 168 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 FAM69AQ5T7M9 428 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SLX4IPQ5VYV7 408 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ZNF566Q969W8 418 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 DHCR7Q9UBM7 475 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 POU2F3Q9UKI9 436 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 POLHQ9Y253 713 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 POLR2AP24928 1970 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 LOC102723532A0A0G2JNH3 316 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 CD8B2A6NJW9 211 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ANKRD30BLA7E2S9 258 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 DCNP07585 359 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 CD8BP10966 210 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 PTNP21246 168 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 VAMP1P23763 118 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ELAVL4P26378 380 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 RNF144AP50876 292 aaPredicted RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 RNASE10Q5GAN6 216 aaKnown RBP11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SYCE2Q6PIF2 218 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SLC37A3Q8NCC5 494 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ST8SIA1Q92185 356 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 ENY2Q9NPA8 101 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 NUDT15Q9NV35 164 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 PLEK2Q9NYT0 353 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 KLK4Q9Y5K2 254 aa11.1□□□□□ -0.63
PTPRF-205ENST00000414879 A0A1W2PR48 441 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 SLC16A7O60669 478 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 DDAH2O95865 285 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 FCGR2AP12318 317 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 GM2AP17900 193 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 EEF1A1P68104 462 aaKnown RBP11.09□□□□□ -0.63
PTPRF-205ENST00000414879 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 METAP1DQ6UB28 335 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-205ENST00000414879 CA13Q8N1Q1 262 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 DUSP19Q8WTR2 217 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 GABARAPL1Q9H0R8 117 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 MCM3APO60318 1980 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 RAB40ALP0C0E4 278 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 AMY2BP19961 511 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 ERV3-1Q14264 604 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 GPR19Q15760 415 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 TMEM236Q5W0B7 351 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 SHISA6Q6ZSJ9 500 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 TMEM150AQ86TG1 271 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 FRMD1Q8N878 549 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 OR5J2Q8NH18 312 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 RAB40AQ8WXH6 277 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 ZNF764Q96H86 408 aaPredicted RBP11.09□□□□□ -0.63
PTPRF-205ENST00000414879 SGCZQ96LD1 299 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 LAT2Q9GZY6 243 aa11.09□□□□□ -0.63
PTPRF-205ENST00000414879 A0A087WZY1 265 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms