RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 SPNP16150 400 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 SSR4P51571 173 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 LSM3P62310 102 aaKnown RBP14.18□□□□□ -0.14
SHMT2-202ENST00000414700 PSPHP78330 225 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 EIPR1Q53HC9 387 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 ASCC1Q8N9N2 400 aaKnown RBP14.18□□□□□ -0.14
SHMT2-202ENST00000414700 OR52J3Q8NH60 311 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 ASB15Q8WXK1 588 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 BARD1Q99728 777 aaKnown RBP14.18□□□□□ -0.14
SHMT2-202ENST00000414700 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.18□□□□□ -0.14
SHMT2-202ENST00000414700 NPAP1Q9NZP6 1156 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 OSGIN1Q9UJX0 560 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 HRH3Q9Y5N1 445 aa14.18□□□□□ -0.14
SHMT2-202ENST00000414700 CPSF4LA6NMK7 179 aaKnown RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 GNGT2O14610 69 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 CCNKO75909 580 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ALX3O95076 343 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 NAGAP17050 411 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 HTR2AP28223 471 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 RYKP34925 604 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 IL18R1Q13478 541 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 KRR1Q13601 381 aaKnown RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 STEAP3Q658P3 488 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 OR5M10Q6IEU7 315 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF605Q86T29 641 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 BEST3Q8N1M1 668 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 GALNT16Q8N428 558 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 TMEM156Q8N614 296 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 MCFD2Q8NI22 146 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 SNIP1Q8TAD8 396 aaKnown RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 THAP4Q8WY91 577 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF524Q96C55 264 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 CCNL2Q96S94 520 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 TBL1XR1Q9BZK7 514 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 CRNNQ9UBG3 495 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF221Q9UK13 617 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 CHCHD2Q9Y6H1 151 aaPredicted RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 CACNA1GO43497 2377 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 PTPRQQ9UMZ3 2332 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 PTGES3LE9PB15 166 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 AP3D1O14617 1153 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 NTN1O95631 604 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ANGPTL1O95841 491 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 NGFRP08138 427 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 RHCEP18577 417 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 LCN1P31025 176 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ACAA2P42765 397 aaKnown RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 CDH12P55289 794 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ISL1P61371 349 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 NCS1P62166 190 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 PPP2R2BQ00005 443 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 KCNAB2Q13303 367 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 SKP2Q13309 424 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 EFR3AQ14156 821 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF691Q5VV52 312 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 MDGA2Q7Z553 956 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 GRAMD2AQ8IUY3 354 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 SVOPLQ8N434 492 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 FAM71CQ8NEG0 241 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 RBM4BQ9BQ04 359 aaKnown RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 RBM4Q9BWF3 364 aaKnown RBP14.17□□□□□ -0.14
SHMT2-202ENST00000414700 ACAD8Q9UKU7 415 aa14.17□□□□□ -0.14
SHMT2-202ENST00000414700 MPDZO75970 2070 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 BSNQ9UPA5 3926 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 TBX1O43435 398 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 THY1P04216 161 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 UBL4AP11441 157 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 PRKCAP17252 672 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 ITGA2P17301 1181 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 HOXB6P17509 224 aaKnown RBP14.16□□□□□ -0.14
SHMT2-202ENST00000414700 ADH7P40394 386 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 PTGDSP41222 190 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 SPIBQ01892 262 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF117Q03924 483 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 INPP5JQ15735 1006 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-202ENST00000414700 ENTPD8Q5MY95 495 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 SYT6Q5T7P8 510 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-202ENST00000414700 PRAMEF20Q5VT98 475 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 ANKRD34AQ69YU3 496 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 SIGIRRQ6IA17 410 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 JMJD6Q6NYC1 403 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-202ENST00000414700 OPN5Q6U736 354 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 NUP54Q7Z3B4 507 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 FBLIM1Q8WUP2 373 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 RNF138Q8WVD3 245 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 TMCO6Q96DC7 493 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 MCHR1Q99705 422 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 PIP5K1AQ99755 562 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 NMNAT1Q9HAN9 279 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-202ENST00000414700 SMURF2Q9HAU4 748 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 ACER3Q9NUN7 267 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 STMN3Q9NZ72 180 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 SAMHD1Q9Y3Z3 626 aaKnown RBP14.16□□□□□ -0.14
SHMT2-202ENST00000414700 LYVE1Q9Y5Y7 322 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 MED12Q93074 2177 aa14.16□□□□□ -0.14
SHMT2-202ENST00000414700 A0A1W2PQD3 144 aa14.15□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF891A8MT65 544 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-202ENST00000414700 ZNF264O43296 627 aa14.15□□□□□ -0.14
SHMT2-202ENST00000414700 CCL3P10147 92 aa14.15□□□□□ -0.14
SHMT2-202ENST00000414700 ENDOUP21128 410 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms