RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TSEN54Q7Z6J9 526 aaKnown RBP27.52■■■□□ 2
CSNK1E-206ENST00000413574 PM20D2Q8IYS1 436 aa27.52■■■□□ 2
CSNK1E-206ENST00000413574 RPRMLQ8N4K4 120 aa27.52■■■□□ 2
CSNK1E-206ENST00000413574 TUBA1CQ9BQE3 449 aa27.52■■■□□ 2
CSNK1E-206ENST00000413574 J3KTA2 159 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 TNFSF11O14788 317 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 IFNW1P05000 195 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 STSP08842 583 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 FOXD4Q12950 439 aaPredicted RBP27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 ULK3Q6PHR2 472 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 MEIOBQ8N635 442 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 UTP4Q969X6 686 aaKnown RBP27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 KLHL15Q96M94 604 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 STOML1Q9UBI4 398 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 PRDM4Q9UKN5 801 aa27.51■■□□□ 1.99
CSNK1E-206ENST00000413574 A0A1W2PNR3 127 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ZC3H12DA2A288 527 aaKnown RBP27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 PTNP21246 168 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 CA7P43166 264 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ERFP50548 548 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ZNF800Q2TB10 664 aaPredicted RBP eCLIP27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 SYT14P1Q58G82 188 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 DNAJA4Q8WW22 397 aaPredicted RBP27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ZNF845Q96IR2 970 aaPredicted RBP27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ADGRG7Q96K78 797 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ARL5BQ96KC2 179 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 LRGUKQ96M69 825 aa27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 MMADHCQ9H3L0 296 aaPredicted RBP27.5■■□□□ 1.99
CSNK1E-206ENST00000413574 ARHGAP21Q5T5U3 1957 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 FUT4P22083 530 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 FLOT2Q14254 428 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 RTL6Q6ICC9 239 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 ZNF613Q6PF04 617 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 C7orf34Q96L11 122 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 OR5B2Q96R09 309 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 SEPHS2Q99611 448 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 UBR5O95071 2799 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 ELOA3DA6NLF2 546 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 hCG_2039718K7EN88 272 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 LYPD3O95274 346 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 STAMBPO95630 424 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 SEMG1P04279 462 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 TFPIP10646 304 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 TAS2R41P59536 307 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 VLDLRP98155 873 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 ELOA3BQ3SY89 546 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 MTX3Q5HYI7 312 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 NCCRP1Q6ZVX7 275 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 ELOA3Q8NG57 546 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 SLC38A4Q969I6 547 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 SLC47A1Q96FL8 570 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 TP63Q9H3D4 680 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 RHCGQ9UBD6 479 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 SLC7A7Q9UM01 511 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 A4GNTQ9UNA3 340 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 FAM215AQ9Y5M1 114 aa27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 SPIN1Q9Y657 262 aaPredicted RBP27.49■■□□□ 1.99
CSNK1E-206ENST00000413574 HIVEP3Q5T1R4 2406 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 TRAPPC13A5PLN9 417 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 FIGNL2A6NMB9 653 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 ADAMDEC1O15204 470 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 ACVR2AP27037 513 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 SLC7A1P30825 629 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 EIF1AXP47813 144 aaKnown RBP27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 ESPNLQ6ZVH7 1005 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 GDF7Q7Z4P5 450 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 P3H2Q8IVL5 708 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 OR10D3Q8NH80 312 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 OR2V1Q8NHB1 315 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 SLC41A3Q96GZ6 507 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 TRIB1Q96RU8 372 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 COQ10BQ9H8M1 238 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 SELENONQ9NZV5 590 aa27.48■■□□□ 1.99
CSNK1E-206ENST00000413574 MYO7BQ6PIF6 2116 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 CLCA1A8K7I4 914 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 AHRRA9YTQ3 701 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 WDR1O75083 606 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 CASP6P55212 293 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 ACSF3Q4G176 576 aaPredicted RBP27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 HBMQ6B0K9 141 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 RPTNQ6XPR3 784 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 WDR88Q6ZMY6 472 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 YTHDF3Q7Z739 585 aaKnown RBP27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 SLC25A43Q8WUT9 341 aaPredicted RBP27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 RIMS3Q9UJD0 308 aa27.47■■□□□ 1.99
CSNK1E-206ENST00000413574 PHF3Q92576 2039 aaKnown RBP27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 GJE1A6NN92 205 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 FFAR1O14842 300 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 ZNF208O43345 1280 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 CXCL13O43927 109 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 DIRAS1O95057 198 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 C1orf185Q5T7R7 199 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 FJX1Q86VR8 437 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 ZPLD1Q8TCW7 415 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 C12orf10Q9HB07 376 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 NDUFAF4Q9P032 175 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 ENPP4Q9Y6X5 453 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 FLNCQ14315 2725 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 MYO18BQ8IUG5 2567 aa27.46■■□□□ 1.99
CSNK1E-206ENST00000413574 A0A087WUJ7 227 aa27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms