RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 SDR9C7Q8NEX9 313 aa13.8□□□□□ -0.2
TTC39A-208ENST00000413473 OR52R1Q8NGF1 315 aa13.8□□□□□ -0.2
TTC39A-208ENST00000413473 YIPF5Q969M3 257 aa13.8□□□□□ -0.2
TTC39A-208ENST00000413473 CITED4Q96RK1 184 aa13.8□□□□□ -0.2
TTC39A-208ENST00000413473 DPAGT1Q9H3H5 408 aa13.8□□□□□ -0.2
TTC39A-208ENST00000413473 FBXL21Q9UKT6 434 aa13.8□□□□□ -0.2
TTC39A-208ENST00000413473 A0A1W2PQF6 199 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 IFNGP01579 166 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 HOXC4P09017 264 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-208ENST00000413473 ACAA2P42765 397 aaKnown RBP13.79□□□□□ -0.2
TTC39A-208ENST00000413473 DGCR2P98153 550 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 ESPNLQ6ZVH7 1005 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 TOMM5Q8N4H5 51 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 C7orf57Q8NEG2 295 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 OR4N2Q8NGD1 307 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 CTHRC1Q96CG8 243 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 SCMH1Q96GD3 660 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.79□□□□□ -0.2
TTC39A-208ENST00000413473 GHITMQ9H3K2 345 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 FANCMQ8IYD8 2048 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 NKX2-2O95096 273 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 CBX7O95931 251 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 TCRBP04435 133 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 HIST1H1CP16403 213 aaKnown RBP13.79□□□□□ -0.2
TTC39A-208ENST00000413473 GIFP27352 417 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 ANKRD54Q6NXT1 300 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 ARHGAP11AQ6P4F7 1023 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 SIAH3Q8IW03 269 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 CA13Q8N1Q1 262 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 C9orf62Q8N4C0 152 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 FAM98AQ8NCA5 519 aaKnown RBP13.79□□□□□ -0.2
TTC39A-208ENST00000413473 ANKRD9Q96BM1 317 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-208ENST00000413473 PELI1Q96FA3 418 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 ZNF426Q9BUY5 554 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 BRD7Q9NPI1 651 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 SLC23A1Q9UHI7 598 aa13.79□□□□□ -0.2
TTC39A-208ENST00000413473 C7orf66A4D0T2 115 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 GALR3O60755 368 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 EPXP11678 715 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 HOXB2P14652 356 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 NAA10P41227 235 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 GDI2P50395 445 aaKnown RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 POU4F2Q12837 409 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 ZNF767PQ75MW2 155 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 TIGD4Q8IY51 512 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 OR11H7Q8NGC8 314 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 PMM1Q92871 262 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 SIPA1Q96FS4 1042 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 GSDMCQ9BYG8 508 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 ZNF222Q9UK12 451 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 TRAV1-2A0A0B4J238 106 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 TEX13CA0A0J9YWL9 993 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 OGG1O15527 345 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 TSC22D2O75157 780 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 UBL3O95164 117 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 SERPINA3P01011 423 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 PSG6Q00889 435 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 CAMK2BQ13554 666 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 CLPPQ16740 277 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 CEP78Q5JTW2 689 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 TMEM31Q5JXX7 168 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 HACD4Q5VWC8 232 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 MTFR2Q6P444 385 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 SFTPA2Q8IWL1 248 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 BAHD1Q8TBE0 780 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 GABRG3Q99928 467 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 CACNG6Q9BXT2 260 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 TWSG1Q9GZX9 223 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 DNAJB12Q9NXW2 375 aaKnown RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 STMN3Q9NZ72 180 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 SERTAD3Q9UJW9 196 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 AK6Q9Y3D8 172 aaKnown RBP13.78□□□□□ -0.2
TTC39A-208ENST00000413473 IER3IP1Q9Y5U9 82 aa13.78□□□□□ -0.2
TTC39A-208ENST00000413473 LRRN3E7EW58 273 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 TNFRSF10AO00220 468 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 FLRT2O43155 660 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 SDHBP21912 280 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 STOMP27105 288 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 CAPZA2P47755 286 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 MMP15P51511 669 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 VSX2P58304 361 aaPredicted RBP13.77□□□□□ -0.2
TTC39A-208ENST00000413473 SIRPAP78324 504 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 CDK5R1Q15078 307 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 SMIM19Q96E16 107 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 ORAI3Q9BRQ5 295 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 TRIM2Q9C040 744 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 LRRN3Q9H3W5 708 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 POLE3Q9NRF9 147 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 CHRNA9Q9UGM1 479 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 ING4Q9UNL4 249 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 NUBP2Q9Y5Y2 271 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 HEATR5AQ86XA9 2040 aa13.77□□□□□ -0.2
TTC39A-208ENST00000413473 HCRTR1O43613 425 aa13.77□□□□□ -0.21
TTC39A-208ENST00000413473 NDUFB5O43674 189 aa13.77□□□□□ -0.21
TTC39A-208ENST00000413473 OR10H2O60403 315 aa13.77□□□□□ -0.21
TTC39A-208ENST00000413473 APBB3O95704 486 aa13.77□□□□□ -0.21
TTC39A-208ENST00000413473 IGKV1D-16P01601 117 aa13.77□□□□□ -0.21
TTC39A-208ENST00000413473 CCR6P51684 374 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms