RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 OR8D4Q8NGM9 314 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 OR13C2Q8NGS9 318 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 FAM81AQ8TBF8 368 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 KCNE4Q8WWG9 221 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TMEM234Q8WY98 164 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 GATA6Q92908 595 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TMEM41AQ96HV5 264 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ING2Q9H160 280 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 EGLN3Q9H6Z9 239 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ZNF696Q9H7X3 374 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 SLC25A19Q9HC21 320 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 PROK2Q9HC23 129 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 SACM1LQ9NTJ5 587 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 TBC1D23Q9NUY8 699 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 MED17Q9NVC6 651 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 MED11Q9P086 117 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 OSGIN1Q9UJX0 560 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 FBXL2Q9UKC9 423 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 POLHQ9Y253 713 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 PCDHGB6Q9Y5F9 930 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 CDH10Q9Y6N8 788 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 HSPE1-MOB4S4R3N1 261 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 ASPMQ8IZT6 3477 aa6.04□□□□□ -1.44
VPS41-204ENST00000413141 KNTC1P50748 2209 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 HEATR5AQ86XA9 2040 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 FREM2Q5SZK8 3169 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TRAV27A0A087WT01 109 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TMED7-TICAM2A0A0A6YYA0 188 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TMEM72A0PK05 275 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 HTR3EA5X5Y0 456 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 EFCAB9A8MZ26 197 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 G3V3Y1 287 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 M0R129 80 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TLX3O43711 291 aaPredicted RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 SUSD5O60279 629 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TRIM3O75382 744 aaPredicted RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 NEURL1O76050 574 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 OR7A10O76100 309 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SNX4O95219 450 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 F10P00742 488 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 P04436 131 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SAGP10523 405 aaPredicted RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 CXCR1P25024 350 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 ELK4P28324 431 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 MASP1P48740 699 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SOX8P57073 446 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 FXYD6P3P58550 94 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 OC90Q02509 493 aaPredicted RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 EGR4Q05215 589 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 MAD2L1BPQ15013 274 aaPredicted RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 ZNF74Q16587 644 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SLC25A53Q5H9E4 307 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 BROXQ5VW32 411 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TMEM236Q5W0B7 351 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 C12orf73Q69YU5 71 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 LAIR2Q6ISS4 152 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 RPL13AP3Q6NVV1 102 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SLC27A4Q6P1M0 643 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 POMZP3Q6PJE2 187 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 LINC00696Q6ZRV3 163 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 PLCZ1Q86YW0 608 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 ENTHD1Q8IYW4 607 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 CDK20Q8IZL9 346 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 DEPDC4Q8N2C3 294 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 ZNF786Q8N393 782 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 IQCF1Q8N6M8 205 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 ZNF454Q8N9F8 522 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 ZNF248Q8NDW4 579 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 OR4K17Q8NGC6 315 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SNIP1Q8TAD8 396 aaKnown RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 CNIH3Q8TBE1 160 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TEX47Q8TBZ9 253 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 POC1BQ8TC44 478 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 APH1BQ8WW43 257 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 FGF11Q92914 225 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SGTBQ96EQ0 304 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 C1GALT1C1Q96EU7 318 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 MRGPRX4Q96LA9 322 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 NPAS1Q99742 590 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 UTP23Q9BRU9 249 aaKnown RBP6.03□□□□□ -1.44
VPS41-204ENST00000413141 OR52D1Q9H346 318 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 IMPAD1Q9NX62 359 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 GPR83Q9NYM4 423 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 IL20Q9NYY1 176 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 STMN3Q9NZ72 180 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 LRFN1Q9P244 771 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 CHRNA9Q9UGM1 479 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 LHX6Q9UPM6 363 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 RNF6Q9Y252 685 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 VDAC3Q9Y277 283 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 SIGLEC7Q9Y286 467 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 TMED7Q9Y3B3 224 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 MSRB2Q9Y3D2 182 aa6.03□□□□□ -1.44
VPS41-204ENST00000413141 AKAP13Q12802 2813 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 TRAV36DV7A0A075B6V5 113 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 A0A087WZY1 265 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 ZC3H12DA2A288 527 aaKnown RBP6.02□□□□□ -1.45
VPS41-204ENST00000413141 MAGEA13PA6NCF6 341 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 LRRC3CA6NJW4 275 aa6.02□□□□□ -1.45
VPS41-204ENST00000413141 A6NL46 340 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms