RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SCELO95171 688 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 TSPAN19P0C672 248 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 SRMP19623 302 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 GRK4P32298 578 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 AKR1C3P42330 323 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CRISP3P54108 245 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PPP3R1P63098 170 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 MESP2Q0VG99 397 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PGM5Q15124 567 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 TGIF1Q15583 401 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CRY2Q49AN0 593 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ARHGAP15Q53QZ3 475 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 LRIF1Q5T3J3 769 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ZNF836Q6ZNA1 936 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 APCDD1Q8J025 514 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ATP6V1C2Q8NEY4 427 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 SAT2Q96F10 170 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 CDK15Q96Q40 435 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR8B4Q96RC9 309 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 TM6SF2Q9BZW4 377 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 NRSN2Q9GZP1 204 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 COMMD4Q9H0A8 199 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 GSTO2Q9H4Y5 243 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 STK25O00506 426 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CXCR6O00574 342 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PIP5K1BO14986 540 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 NME2P1O60361 137 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PCCBP05166 539 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 UBCP0CG48 685 aaKnown RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 SLC2A2P11168 524 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 CCL2P13500 99 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 RAB6AP20340 208 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 NFYAP23511 347 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 CTSSP25774 331 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CERS1P27544 350 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CRYBA4P53673 196 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR5I1Q13606 314 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 MEF2DQ14814 521 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 C3orf38Q5JPI3 329 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 TRAT1Q6PIZ9 186 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 TMEM91Q6ZNR0 172 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 NXPE1Q8N323 547 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 HDDC3Q8N4P3 179 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 DTWD1Q8N5C7 304 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 JAGN1Q8N5M9 183 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PNLDC1Q8NA58 520 aaKnown RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 TMEM185AQ8NFB2 350 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR2L2Q8NH16 312 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CXorf40AQ8TE69 158 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 GRHL3Q8TE85 626 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 UBL7Q96S82 380 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 C1GALT1Q9NS00 363 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 HES2Q9Y543 173 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 COL14A1Q05707 1796 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 TBC1D3DA0A087WVF3 549 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TBC1D3IA0A087WXS9 549 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TBC1D3EA0A087X179 549 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 A0A1B0GW55 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 A0A1W2PNV4 684 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 HYKKA2RU49 373 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 C2orf78A6NCI8 922 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TBC1D3LB9A6J9 549 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SULT2B1O00204 365 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CYB5BO43169 146 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 EIF4E2O60573 245 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 CST1P01037 141 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 RPN2P04844 631 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SCG5P05408 212 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SOD3P08294 240 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SLC10A3P09131 477 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 ANKRD34CP0C6C1 535 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4L2P0CJ85 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4L3P0CJ86 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4L4P0CJ87 422 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4L5P0CJ88 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4L6P0CJ89 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DUX4L7P0CJ90 424 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 GZMBP10144 247 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TYRP14679 529 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TYMPP19971 482 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 MAS1LP35410 378 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CDK8P49336 464 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 AKR1C2P52895 323 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 DYNLT1P63172 113 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 YBX1P67809 324 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 SRSF3P84103 164 aaKnown RBP4.84□□□□□ -1.63
HERC4-205ENST00000412272 AKR1C1Q04828 323 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SHBQ15464 509 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SHHQ15465 462 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 ST3GAL2Q16842 350 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SLC22A6Q4U2R8 563 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 ARSIQ5FYB1 569 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TECRLQ5HYJ1 363 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 SIRPB2Q5JXA9 342 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 UBXN11Q5T124 520 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TMEM244Q5VVB8 128 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 PRAMEF18Q5VWM3 479 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 CPZQ66K79 652 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 TBC1D3CQ6IPX1 549 aa4.84□□□□□ -1.63
HERC4-205ENST00000412272 GSG1LQ6UXU4 331 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms