RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 FREM1Q5H8C1 2179 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 PRF1P14222 555 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 RAC3P60763 192 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 BTLAQ7Z6A9 289 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 TREML1Q86YW5 311 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 MCEMP1Q8IX19 187 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SLC35B4Q969S0 331 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 GMPPAQ96IJ6 420 aaPredicted RBP27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SH3GL1Q99961 368 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 ADAM19Q9H013 955 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 FOXD3Q9UJU5 478 aaPredicted RBP27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 CLEC4AQ9UMR7 237 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 FBN2P35556 2912 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 ABCA12Q86UK0 2595 aa27.86■■■□□ 2.05
TRAF3IP1-203ENST00000409739 TPST1O60507 370 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SS18L1O75177 396 aaPredicted RBP27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 COX4I1P13073 169 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 PCGF2P35227 344 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 GLIPR1L2Q4G1C9 344 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 WBP2NLQ6ICG8 309 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 FAM214BQ7L5A3 538 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 CADM2Q8N3J6 435 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 OR11A1Q9GZK7 315 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 MYLK2Q9H1R3 596 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 GID8Q9NWU2 228 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 PRDM4Q9UKN5 801 aa27.85■■■□□ 2.05
TRAF3IP1-203ENST00000409739 TMEM72A0PK05 275 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SMNDC1O75940 238 aaKnown RBP eCLIP27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 PLGP00747 810 aaPredicted RBP27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 TFPIP10646 304 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 CCNA2P20248 432 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 CPA2P48052 419 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 DIO1P49895 249 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 COPZ1P61923 177 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 DMTNQ08495 405 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SNTB1Q13884 538 aaKnown RBP27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 TMPPEQ6ZT21 453 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 FCRLAQ7L513 359 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 CALHM3Q86XJ0 350 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 ZNF295-AS1Q8N0V1 137 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 ABHD3Q8WU67 409 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 REXO5Q96IC2 774 aaKnown RBP27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 ARL5BQ96KC2 179 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 RBM24Q9BX46 236 aaKnown RBP27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 PIF1Q9H611 641 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 GLRX2Q9NS18 164 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 APCP25054 2843 aa27.84■■■□□ 2.05
TRAF3IP1-203ENST00000409739 IGHV3-15A0A0B4J1V0 119 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 PRORSD1PA6NEY8 169 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 A8MXE2 369 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 MSTNO14793 375 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 GCM2O75603 506 aaPredicted RBP27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SERPINB7O75635 380 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 MFN2O95140 757 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 CGAP01215 116 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 FKBP2P26885 142 aaKnown RBP27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 HOXC5Q00444 222 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 ARMC8Q8IUR7 673 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SLC30A8Q8IWU4 369 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 GALNT8Q9NY28 637 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 EMC9Q9Y3B6 208 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 MAST4O15021 2626 aa27.83■■■□□ 2.05
TRAF3IP1-203ENST00000409739 SULT2B1O00204 365 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 ZNF208O43345 1280 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 KLK2P20151 261 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 ENPP1P22413 925 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 MYBPHQ13203 477 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 VMACQ2NL98 169 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 GDF7Q7Z4P5 450 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 BHLHE22Q8NFJ8 381 aaPredicted RBP27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 DNAJA3Q96EY1 480 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 ECSITQ9BQ95 431 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 OPN3Q9H1Y3 402 aaPredicted RBP27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 HDGFL3Q9Y3E1 203 aa27.82■■■□□ 2.04
TRAF3IP1-203ENST00000409739 SMAD9O15198 467 aaKnown RBP27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 PMS2P2O95744 297 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 AGTR1P30556 359 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 CLK1P49759 484 aaKnown RBP27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 CTBP2P56545 445 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 CSNK2A1P68400 391 aaPredicted RBP27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 RNPS1Q15287 305 aaKnown RBP27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 GTF2IRD2BQ6EKJ0 949 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 GTF2IRD2Q86UP8 949 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 OR6K3Q8NGY3 331 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 NOTCH2Q04721 2471 aa27.81■■■□□ 2.04
TRAF3IP1-203ENST00000409739 OPN1SWP03999 348 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 FESP07332 822 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 CD8BP10966 210 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 CPOXP36551 454 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 MAP2K6P52564 334 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 SLC43A2Q8N370 569 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 SMYD1Q8NB12 490 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 C3orf49Q96BT1 292 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 DDIT4LQ96D03 193 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 PROCRQ9UNN8 238 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 USP22Q9UPT9 525 aa27.8■■■□□ 2.04
TRAF3IP1-203ENST00000409739 ZC3H12DA2A288 527 aaKnown RBP27.79■■■□□ 2.04
TRAF3IP1-203ENST00000409739 M0QX08 132 aa27.79■■■□□ 2.04
TRAF3IP1-203ENST00000409739 AIM2O14862 343 aa27.79■■■□□ 2.04
TRAF3IP1-203ENST00000409739 CXCR1P25024 350 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms